Rosetta 3.4
Public Member Functions | Static Public Member Functions
protocols::topology_broker::DisulfJumpClaimer Class Reference

Claimer that works with the old system of BaseJumpSetup it supports only JumpFrames of type [ BBTorsion ] UpJump DownJump [ BBTorsion ] the class JumpSample is still used to transport the information jumps and jump_atoms, but cuts are ignored all functionality of JumpSample is not used anymore. More...

#include <DisulfJumpClaimer.hh>

Inheritance diagram for protocols::topology_broker::DisulfJumpClaimer:
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List of all members.

Public Member Functions

 DisulfJumpClaimer ()
virtual TopologyClaimerOP clone () const
 clone it!
void generate_jump_frags (protocols::jumping::DisulfPairingLibrary const &lib, core::fragment::FrameList &all_frames) const
virtual void generate_claims (DofClaims &)
 generate first round of DOF claims
virtual void new_decoy (core::pose::Pose const &)
 an input pose is given, i.e., a starting structure for resampling don't make random choices, base choices on given pose
virtual void new_decoy ()
 a new decoy --- random choices to be made ? make them here
virtual std::string type () const
 type() is specifying the output name of the TopologyClaimer
virtual void initialize_dofs (core::pose::Pose &, DofClaims const &init_claims, DofClaims &failed_to_init)
 is called after all round1 claims have been approved or retracted -- additional claims can be issued in this round
virtual bool read_tag (std::string tag, std::istream &is)

Static Public Member Functions

static std::string _static_type_name ()

Detailed Description

Claimer that works with the old system of BaseJumpSetup it supports only JumpFrames of type [ BBTorsion ] UpJump DownJump [ BBTorsion ] the class JumpSample is still used to transport the information jumps and jump_atoms, but cuts are ignored all functionality of JumpSample is not used anymore.


Constructor & Destructor Documentation

protocols::topology_broker::DisulfJumpClaimer::DisulfJumpClaimer ( )

Member Function Documentation

static std::string protocols::topology_broker::DisulfJumpClaimer::_static_type_name ( ) [inline, static]

Reimplemented from protocols::topology_broker::FragmentClaimer.

Referenced by type().

virtual TopologyClaimerOP protocols::topology_broker::DisulfJumpClaimer::clone ( ) const [inline, virtual]

clone it!

Reimplemented from protocols::topology_broker::FragmentClaimer.

References DisulfJumpClaimer().

void protocols::topology_broker::DisulfJumpClaimer::generate_claims ( DofClaims ) [virtual]
void protocols::topology_broker::DisulfJumpClaimer::generate_jump_frags ( protocols::jumping::DisulfPairingLibrary const &  lib,
core::fragment::FrameList all_frames 
) const
void protocols::topology_broker::DisulfJumpClaimer::initialize_dofs ( core::pose::Pose pose,
DofClaims const &  init_claims,
DofClaims failed_to_init 
) [virtual]

is called after all round1 claims have been approved or retracted -- additional claims can be issued in this round

Reimplemented from protocols::topology_broker::FragmentClaimer.

void protocols::topology_broker::DisulfJumpClaimer::new_decoy ( ) [virtual]
void protocols::topology_broker::DisulfJumpClaimer::new_decoy ( core::pose::Pose const &  ) [virtual]

an input pose is given, i.e., a starting structure for resampling don't make random choices, base choices on given pose

Reimplemented from protocols::topology_broker::TopologyClaimer.

References new_decoy().

bool protocols::topology_broker::DisulfJumpClaimer::read_tag ( std::string  tag,
std::istream &  is 
) [virtual]
virtual std::string protocols::topology_broker::DisulfJumpClaimer::type ( ) const [inline, virtual]

type() is specifying the output name of the TopologyClaimer

Reimplemented from protocols::topology_broker::FragmentClaimer.

References _static_type_name().


The documentation for this class was generated from the following files:
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