Rosetta 3.4
core::scoring::saxs::SAXSEnergy Member List
This is the complete list of members for core::scoring::saxs::SAXSEnergy, including all inherited members.
atomic_interaction_cutoff() const core::scoring::methods::WholeStructureEnergy [inline, virtual]
cen_cfg_file_core::scoring::saxs::SAXSEnergy [static]
clone() const core::scoring::saxs::SAXSEnergy [inline, virtual]
compute_intensities(const core::pose::Pose &, utility::vector1< Real > &) const core::scoring::saxs::SAXSEnergy [protected]
compute_zero_intensity() const core::scoring::saxs::SAXSEnergy
count_scoring_atoms()core::scoring::saxs::SAXSEnergy [inline]
create_energy_method(methods::EnergyMethodOptions const &) const core::scoring::saxs::SAXSEnergy [inline]
defines_high_order_terms(pose::Pose const &) const core::scoring::methods::EnergyMethod [virtual]
EnergyMethod(EnergyMethodCreatorOP creator)core::scoring::methods::EnergyMethod
EnergyMethod(EnergyMethod const &src)core::scoring::methods::EnergyMethod
eval_atom_derivative(id::AtomID const &id, pose::Pose const &pose, kinematics::DomainMap const &domain_map, ScoreFunction const &sfxn, EnergyMap const &emap, Vector &F1, Vector &F2) const core::scoring::methods::EnergyMethod [virtual]
fa_cfg_file_core::scoring::saxs::SAXSEnergy [static]
finalize_after_derivatives(pose::Pose &, ScoreFunction const &) const core::scoring::methods::EnergyMethod [virtual]
finalize_total_energy(pose::Pose &pose, ScoreFunction const &, EnergyMap &totals) const core::scoring::saxs::SAXSEnergy [virtual]
fit_intensities(const utility::vector1< Real > &, const utility::vector1< Real > &, utility::vector1< Real > &) const core::scoring::saxs::SAXSEnergy [protected]
get_pose_intensities()core::scoring::saxs::SAXSEnergy [inline]
get_q()core::scoring::saxs::SAXSEnergy [inline]
get_reference_intensities()core::scoring::saxs::SAXSEnergy [inline]
indicate_required_context_graphs(utility::vector1< bool > &) const core::scoring::saxs::SAXSEnergy [inline, virtual]
init_ff(const std::string &)core::scoring::saxs::SAXSEnergy [protected]
method_type() const core::scoring::methods::WholeStructureEnergy [virtual]
minimize_in_whole_structure_context(pose::Pose const &) const core::scoring::methods::EnergyMethod [virtual]
parent typedefcore::scoring::methods::WholeStructureEnergy
prepare_rotamers_for_packing(pose::Pose const &, conformation::RotamerSetBase &) const core::scoring::methods::EnergyMethod [virtual]
read_intensities(std::string &, utility::vector1< Real > &) const core::scoring::saxs::SAXSEnergy [protected]
read_spectrum(std::string &, utility::vector1< Real > &, utility::vector1< Real > &) const core::scoring::saxs::SAXSEnergy [protected]
rehash_form_factors(const core::pose::Pose &pose) const core::scoring::saxs::SAXSEnergy [protected]
saxs_score_variant_core::scoring::saxs::SAXSEnergy [protected]
SAXSEnergy(std::string &, core::chemical::ResidueTypeSetCAP, ScoreType, SAXSEnergyCreator *)core::scoring::saxs::SAXSEnergy
SAXSEnergy(const std::string &, const utility::vector1< Real > &, const utility::vector1< Real > &, ScoreType, SAXSEnergyCreator *)core::scoring::saxs::SAXSEnergy
score_types() const core::scoring::methods::EnergyMethod [inline]
set_score_types(EnergyMethodCreatorOP creator)core::scoring::methods::EnergyMethod [protected]
set_up_q(const utility::vector1< Real > &)core::scoring::saxs::SAXSEnergy [protected]
set_up_q()core::scoring::saxs::SAXSEnergy [protected]
setup_for_derivatives(pose::Pose &pose, ScoreFunction const &sfxn) const core::scoring::methods::EnergyMethod [virtual]
setup_for_minimizing(pose::Pose &, ScoreFunction const &, kinematics::MinimizerMapBase const &) const core::scoring::methods::EnergyMethod [virtual]
setup_for_packing(pose::Pose &, utility::vector1< bool > const &, utility::vector1< bool > const &) const core::scoring::methods::EnergyMethod [virtual]
setup_for_scoring(pose::Pose &, ScoreFunction const &) const core::scoring::methods::EnergyMethod [virtual]
the_config_file_core::scoring::saxs::SAXSEnergy [protected]
total_energy(const pose::Pose &pose) const core::scoring::saxs::SAXSEnergy
update_residue_for_packing(pose::Pose &, Size resid) const core::scoring::methods::EnergyMethod [virtual]
WholeStructureEnergy(EnergyMethodCreatorOP)core::scoring::methods::WholeStructureEnergy
~EnergyMethod()core::scoring::methods::EnergyMethod [virtual]
~SAXSEnergy()core::scoring::saxs::SAXSEnergy [inline, virtual]
~WholeStructureEnergy()core::scoring::methods::WholeStructureEnergy [inline, virtual]
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