Rosetta 3.4
Classes | Functions
protocols::loop_build Namespace Reference

Classes

class  LoopMover_SlidingWindow
 LoopMover utilizing fragment insertion, ccd loop closure, and minimization. More...
class  LoopMover_SlidingWindowCreator
 creator for the LoopMover_SlidingWindowCreator class More...

Functions

int LoopBuild_main (bool boinc_mode)
static basic::Tracer TR ("protocols.loop_build.LoopMover_SlidingWindow")
static
numeric::random::RandomGenerator 
RG (10003)

Function Documentation

int protocols::loop_build::LoopBuild_main ( bool  boinc_mode)

References core::scoring::electron_density::add_dens_scores_from_cmdline_to_scorefxn(), protocols::comparative_modeling::LoopRelaxMover::apply(), protocols::electron_density::SetupForDensityScoringMover::apply(), protocols::simple_moves::symmetry::SetupForSymmetryMover::apply(), core::io::pdb::dump_pdb(), protocols::comparative_modeling::LoopRelaxMover::frag_libs(), protocols::loops::get_cen_scorefxn(), protocols::loops::get_fa_scorefxn(), core::io::silent::SilentStructFactory::get_instance(), protocols::evaluation::EvaluatorFactory::get_instance(), core::chemical::ChemicalManager::get_instance(), protocols::moves::Mover::get_last_move_status(), core::io::silent::SilentStructFactory::get_silent_struct(), core::pose::getPoseExtraScores(), core::io::silent::gzip(), protocols::comparative_modeling::LoopRelaxMover::intermedrelax(), protocols::comparative_modeling::LoopRelaxMover::loops(), protocols::moves::MS_SUCCESS, make_table_of_pilot_apps::name, core::import_pose::pose_from_pdb(), protocols::loops::read_loop_fragments(), protocols::comparative_modeling::LoopRelaxMover::refine(), protocols::comparative_modeling::LoopRelaxMover::relax(), protocols::comparative_modeling::LoopRelaxMover::remodel(), core::chemical::ChemicalManager::residue_type_set(), protocols::comparative_modeling::LoopRelaxMover::scorefxns(), protocols::moves::Mover::set_current_tag(), protocols::loops::set_secstruct_from_dssp(), protocols::loops::set_secstruct_from_psipred_ss2(), core::pose::set_ss_from_phipsi(), and TR().

static numeric::random::RandomGenerator protocols::loop_build::RG ( 10003  ) [static]
static basic::Tracer protocols::loop_build::TR ( "protocols.loop_build.LoopMover_SlidingWindow"  ) [static]
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