Rosetta 3.4
Public Member Functions
protocols::swa::StepWiseClusterer Class Reference

#include <StepWiseClusterer.hh>

Inheritance diagram for protocols::swa::StepWiseClusterer:
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List of all members.

Public Member Functions

 StepWiseClusterer (utility::vector1< std::string > const &silent_files_in)
 StepWiseClusterer (std::string const &silent_file_in)
 StepWiseClusterer (core::io::silent::SilentFileDataOP &sfd)
 ~StepWiseClusterer ()
void set_max_decoys (core::Size const &setting)
 Filter a list of poses by score.
void set_cluster_radius (core::Real const &setting)
void set_cluster_by_all_atom_rmsd (core::Real const &setting)
void set_rename_tags (core::Real const &setting)
void set_score_diff_cut (core::Real const &setting)
void set_auto_tune (bool const auto_tune)
void set_force_align (bool const force_align)
void set_calc_rms_res (utility::vector1< core::Size > const &calc_rms_res)
void set_silent_file_data (core::io::silent::SilentFileDataOP &sfd)
void set_rsd_type_set (std::string const &setting)
void cluster ()
core::io::silent::SilentFileDataOP silent_file_data ()
void output_silent_file (std::string const &silent_file)
PoseList clustered_pose_list ()
utility::vector1
< core::io::silent::SilentStructOP > & 
silent_struct_output_list ()

Constructor & Destructor Documentation

protocols::swa::StepWiseClusterer::StepWiseClusterer ( utility::vector1< std::string > const &  silent_files_in)
protocols::swa::StepWiseClusterer::StepWiseClusterer ( std::string const &  silent_file_in)
protocols::swa::StepWiseClusterer::StepWiseClusterer ( core::io::silent::SilentFileDataOP sfd)
protocols::swa::StepWiseClusterer::~StepWiseClusterer ( )

Member Function Documentation

void protocols::swa::StepWiseClusterer::cluster ( )
PoseList protocols::swa::StepWiseClusterer::clustered_pose_list ( )
void protocols::swa::StepWiseClusterer::output_silent_file ( std::string const &  silent_file)
void protocols::swa::StepWiseClusterer::set_auto_tune ( bool const  auto_tune) [inline]
void protocols::swa::StepWiseClusterer::set_calc_rms_res ( utility::vector1< core::Size > const &  calc_rms_res)
void protocols::swa::StepWiseClusterer::set_cluster_by_all_atom_rmsd ( core::Real const &  setting) [inline]
void protocols::swa::StepWiseClusterer::set_cluster_radius ( core::Real const &  setting) [inline]
void protocols::swa::StepWiseClusterer::set_force_align ( bool const  force_align) [inline]
void protocols::swa::StepWiseClusterer::set_max_decoys ( core::Size const &  setting) [inline]

Filter a list of poses by score.

Referenced by protocols::swa::protein::generate_beta_database_test().

void protocols::swa::StepWiseClusterer::set_rename_tags ( core::Real const &  setting) [inline]
void protocols::swa::StepWiseClusterer::set_rsd_type_set ( std::string const &  setting) [inline]
void protocols::swa::StepWiseClusterer::set_score_diff_cut ( core::Real const &  setting) [inline]
void protocols::swa::StepWiseClusterer::set_silent_file_data ( core::io::silent::SilentFileDataOP sfd)
core::io::silent::SilentFileDataOP protocols::swa::StepWiseClusterer::silent_file_data ( )
utility::vector1< core::io::silent::SilentStructOP >& protocols::swa::StepWiseClusterer::silent_struct_output_list ( ) [inline]

The documentation for this class was generated from the following files:
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