Rosetta 3.4
Public Member Functions
protocols::protein_interface_design::filters::SequenceRecoveryFilter Class Reference

#include <SequenceRecoveryFilter.hh>

Inheritance diagram for protocols::protein_interface_design::filters::SequenceRecoveryFilter:
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Collaboration diagram for protocols::protein_interface_design::filters::SequenceRecoveryFilter:
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List of all members.

Public Member Functions

 SequenceRecoveryFilter ()
 default ctor
virtual bool apply (core::pose::Pose const &pose) const
 Constructor with a single target residue.
virtual void report (std::ostream &out, core::pose::Pose const &pose) const
virtual core::Real report_sm (core::pose::Pose const &pose) const
 used to report filter internals through a score or silent file
virtual
protocols::filters::FilterOP 
clone () const
virtual
protocols::filters::FilterOP 
fresh_instance () const
core::Real compute (core::pose::Pose const &pose) const
virtual ~SequenceRecoveryFilter ()
core::pack::task::TaskFactoryOP task_factory () const
void task_factory (core::pack::task::TaskFactoryOP task_factory)
core::Real rate_threshold () const
void rate_threshold (core::Real const rate)
core::pose::PoseCOP reference_pose () const
void reference_pose (core::pose::PoseCOP reference_pose)
void reference_pose (core::pose::Pose const &pose)
void parse_my_tag (utility::tag::TagPtr const tag, protocols::moves::DataMap &, protocols::filters::Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &)

Constructor & Destructor Documentation

protocols::protein_interface_design::filters::SequenceRecoveryFilter::SequenceRecoveryFilter ( )
protocols::protein_interface_design::filters::SequenceRecoveryFilter::~SequenceRecoveryFilter ( ) [virtual]

Member Function Documentation

bool protocols::protein_interface_design::filters::SequenceRecoveryFilter::apply ( core::pose::Pose const &  pose) const [virtual]

Constructor with a single target residue.

Implements protocols::filters::Filter.

References compute(), and protocols::protein_interface_design::filters::TR().

protocols::filters::FilterOP protocols::protein_interface_design::filters::SequenceRecoveryFilter::clone ( ) const [virtual]
core::Real protocols::protein_interface_design::filters::SequenceRecoveryFilter::compute ( core::pose::Pose const &  pose) const
protocols::filters::FilterOP protocols::protein_interface_design::filters::SequenceRecoveryFilter::fresh_instance ( ) const [virtual]
void protocols::protein_interface_design::filters::SequenceRecoveryFilter::parse_my_tag ( utility::tag::TagPtr const  tag,
protocols::moves::DataMap data,
protocols::filters::Filters_map const &  ,
protocols::moves::Movers_map const &  ,
core::pose::Pose const &  pose 
) [virtual]
core::Real protocols::protein_interface_design::filters::SequenceRecoveryFilter::rate_threshold ( ) const

Referenced by parse_my_tag().

void protocols::protein_interface_design::filters::SequenceRecoveryFilter::rate_threshold ( core::Real const  rate)
core::pose::PoseCOP protocols::protein_interface_design::filters::SequenceRecoveryFilter::reference_pose ( ) const

Referenced by compute(), and parse_my_tag().

void protocols::protein_interface_design::filters::SequenceRecoveryFilter::reference_pose ( core::pose::Pose const &  pose)
void protocols::protein_interface_design::filters::SequenceRecoveryFilter::reference_pose ( core::pose::PoseCOP  reference_pose)
void protocols::protein_interface_design::filters::SequenceRecoveryFilter::report ( std::ostream &  out,
core::pose::Pose const &  pose 
) const [virtual]

Reimplemented from protocols::filters::Filter.

References compute().

core::Real protocols::protein_interface_design::filters::SequenceRecoveryFilter::report_sm ( core::pose::Pose const &  ) const [virtual]

used to report filter internals through a score or silent file

Reimplemented from protocols::filters::Filter.

References compute().

void protocols::protein_interface_design::filters::SequenceRecoveryFilter::task_factory ( core::pack::task::TaskFactoryOP  task_factory)

References task_factory().

core::pack::task::TaskFactoryOP protocols::protein_interface_design::filters::SequenceRecoveryFilter::task_factory ( ) const

Referenced by compute(), parse_my_tag(), and task_factory().


The documentation for this class was generated from the following files:
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