Rosetta 3.4
protocols::forge::remodel::RemodelLoopMover Member List
This is the complete list of members for protocols::forge::remodel::RemodelLoopMover, including all inherited members.
add_fragments(FragSetCOP fragset)protocols::forge::remodel::RemodelLoopMover
add_loop(Loop const loop)protocols::forge::remodel::RemodelLoopMover [inline]
allowed_closure_attempts() const protocols::forge::remodel::RemodelLoopMover [inline]
allowed_closure_attempts(Size const attempts)protocols::forge::remodel::RemodelLoopMover [inline]
apply(Pose &pose)protocols::forge::remodel::RemodelLoopMover [virtual]
boost_closure_cycles() const protocols::forge::remodel::RemodelLoopMover [inline]
boost_closure_cycles(Size const cycles)protocols::forge::remodel::RemodelLoopMover [inline]
boost_closure_stage(Pose &pose, MonteCarlo &mc, Real const cbreak_increment)protocols::forge::remodel::RemodelLoopMover [protected]
check_closure_criteria(Pose &pose, bool const show_in_tracer=false)protocols::forge::remodel::RemodelLoopMover [protected]
ClassicFragmentMoverOP typedefprotocols::forge::remodel::RemodelLoopMover
clear_fragments()protocols::forge::remodel::RemodelLoopMover
clear_info()protocols::moves::Mover [inline, virtual]
clone() const protocols::forge::remodel::RemodelLoopMover [virtual]
count_moveable_residues(MoveMap const &movemap, Size const left, Size const right)protocols::forge::remodel::RemodelLoopMover [protected]
create_fragment_movers(MoveMap const &movemap, Size const largest_frag_size=0)protocols::forge::remodel::RemodelLoopMover [protected]
create_fragment_movers(MoveMap const &movemap, FragmentMoverOPs &frag_movers, Size const largest_frag_size=0)protocols::forge::remodel::RemodelLoopMover [protected]
create_per_loop_fragment_movers(loops::LoopsOP const loops, Size const largest_frag_size=0)protocols::forge::remodel::RemodelLoopMover [protected]
DataMap typedefprotocols::forge::remodel::RemodelLoopMover
determine_loops_to_model(Pose &pose)protocols::forge::remodel::RemodelLoopMover [protected]
enforce_false_movemap(MoveMap &movemap)protocols::forge::remodel::RemodelLoopMover [protected]
false_movemap() const protocols::forge::remodel::RemodelLoopMover [inline]
false_movemap(MoveMap const &movemap)protocols::forge::remodel::RemodelLoopMover [inline]
Filters_map typedefprotocols::forge::remodel::RemodelLoopMover
FragmentMoverOP typedefprotocols::forge::remodel::RemodelLoopMover
FragmentMoverOPs typedefprotocols::forge::remodel::RemodelLoopMover
FragSetCOP typedefprotocols::forge::remodel::RemodelLoopMover
FragSetOP typedefprotocols::forge::remodel::RemodelLoopMover
FragSetOPs typedefprotocols::forge::remodel::RemodelLoopMover
fresh_instance() const protocols::forge::remodel::RemodelLoopMover [virtual]
get_additional_output()protocols::moves::Mover [virtual]
get_current_job() const protocols::moves::Mover
get_current_tag() const protocols::moves::Mover [inline]
get_input_pose() const protocols::moves::Mover
get_last_move_status() const protocols::moves::Mover
get_name() const protocols::forge::remodel::RemodelLoopMover [virtual]
get_native_pose() const protocols::moves::Mover
get_type() const protocols::moves::Mover [inline]
independent_cycles() const protocols::forge::remodel::RemodelLoopMover [inline]
independent_cycles(Size const cycles)protocols::forge::remodel::RemodelLoopMover [inline]
independent_stage(Pose &pose, MonteCarlo &mc, Real const cbreak_increment)protocols::forge::remodel::RemodelLoopMover [protected]
info()protocols::moves::Mover [inline, virtual]
info() const protocols::moves::Mover [inline, virtual]
insert_random_smallestmer_per_loop(Pose &pose, bool const only_broken_loops=true)protocols::forge::remodel::RemodelLoopMover [protected]
last_proposal_density_ratio()protocols::moves::Mover [inline, virtual]
Loop typedefprotocols::forge::remodel::RemodelLoopMover
loops() const protocols::forge::remodel::RemodelLoopMover [inline]
loops(loops::LoopsOP const loops)protocols::forge::remodel::RemodelLoopMover [inline]
Loops typedefprotocols::forge::remodel::RemodelLoopMover
mark_loop_moveable(Loop const &loop, MoveMap &movemap, bool const allow_omega)protocols::forge::remodel::RemodelLoopMover [protected]
mark_loops_moveable(loops::LoopsOP const loops, MoveMap &movemap, bool const allow_omega)protocols::forge::remodel::RemodelLoopMover [protected]
max_linear_chainbreak() const protocols::forge::remodel::RemodelLoopMover [inline]
max_linear_chainbreak(Real const val)protocols::forge::remodel::RemodelLoopMover [inline]
MonteCarlo typedefprotocols::forge::remodel::RemodelLoopMover
MoveMap typedefprotocols::forge::remodel::RemodelLoopMover
Mover()protocols::moves::Mover
Mover(std::string const &type_name)protocols::moves::Mover
Mover(Mover const &other)protocols::moves::Mover
MoverOP typedefprotocols::forge::remodel::RemodelLoopMover
Movers_map typedefprotocols::forge::remodel::RemodelLoopMover
protocols::moves::Mover::operator=(Mover const &other)protocols::moves::Mover
Pose typedefprotocols::forge::remodel::RemodelLoopMover
PoseCOP typedefprotocols::moves::Mover
PoseOP typedefprotocols::forge::remodel::RemodelLoopMover
randomize_loops() const protocols::forge::remodel::RemodelLoopMover [inline]
randomize_loops(bool const flag)protocols::forge::remodel::RemodelLoopMover [inline]
randomize_stage(Pose &pose)protocols::forge::remodel::RemodelLoopMover
Real typedefprotocols::forge::remodel::RemodelLoopMover
register_options()protocols::forge::remodel::RemodelLoopMover [static]
reinitialize_for_each_job() const protocols::moves::Mover [virtual]
reinitialize_for_new_input() const protocols::moves::Mover [virtual]
RemodelLoopMover()protocols::forge::remodel::RemodelLoopMover
RemodelLoopMover(loops::LoopsOP const loops)protocols::forge::remodel::RemodelLoopMover
RemodelLoopMover(RemodelLoopMover const &rval)protocols::forge::remodel::RemodelLoopMover
repeat_generation(Pose &pose, Pose &repeat_pose)protocols::forge::remodel::RemodelLoopMover
repeat_generation_with_additional_residue(Pose &pose, Pose &repeat_pose)protocols::forge::remodel::RemodelLoopMover
repeat_propagation(Pose &pose, Pose &repeat_pose, Size repeat_number)protocols::forge::remodel::RemodelLoopMover
reset_status()protocols::moves::Mover
scorefunction() const protocols::forge::remodel::RemodelLoopMover
scorefunction(ScoreFunction const &sfx)protocols::forge::remodel::RemodelLoopMover
ScoreFunction typedefprotocols::forge::remodel::RemodelLoopMover
ScoreFunctionOP typedefprotocols::forge::remodel::RemodelLoopMover
set_current_job(protocols::jobdist::BasicJobCOP job)protocols::moves::Mover
set_current_tag(std::string const &new_tag)protocols::moves::Mover [inline]
set_input_pose(PoseCOP pose)protocols::moves::Mover [virtual]
set_last_move_status(MoverStatus status)protocols::moves::Mover [protected]
set_native_pose(PoseCOP pose)protocols::moves::Mover [virtual]
set_param_from_options()protocols::forge::remodel::RemodelLoopMover
set_repeat_tail_length(Size const length)protocols::forge::remodel::RemodelLoopMover [inline]
simultaneous_cycles() const protocols::forge::remodel::RemodelLoopMover [inline]
simultaneous_cycles(Size const cycles)protocols::forge::remodel::RemodelLoopMover [inline]
simultaneous_stage(Pose &pose, MonteCarlo &mc, Real const cbreak_increment)protocols::forge::remodel::RemodelLoopMover [protected]
Size typedefprotocols::forge::remodel::RemodelLoopMover
String typedefprotocols::forge::remodel::RemodelLoopMover
Strings typedefprotocols::moves::Mover
TagPtr typedefprotocols::forge::remodel::RemodelLoopMover
temperature() const protocols::forge::remodel::RemodelLoopMover [inline]
temperature(Real const temp)protocols::forge::remodel::RemodelLoopMover [inline]
test_move(Pose &pose)protocols::moves::Mover [inline, virtual]
total_standard_cycles() const protocols::forge::remodel::RemodelLoopMover [inline]
type() const protocols::moves::Mover [inline]
type(const std::string &type_in)protocols::moves::Mover [inline]
~Mover()protocols::moves::Mover [virtual]
~RemodelLoopMover()protocols::forge::remodel::RemodelLoopMover [virtual]
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