Rosetta 3.4
Public Types | Public Member Functions
core::scoring::methods::ChainbreakEnergy Class Reference

ChainbreakEnergy class iterates across all residues in finalize() and determines the penalty between residues i and i+1 by how much their psueduo atoms do not align. More...

#include <ChainbreakEnergy.hh>

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List of all members.

Public Types

typedef WholeStructureEnergy parent

Public Member Functions

 ChainbreakEnergy ()
virtual EnergyMethodOP clone () const
 clone
virtual void finalize_total_energy (pose::Pose &pose, ScoreFunction const &, EnergyMap &totals) const
 called at the end of energy evaluation
virtual void eval_atom_derivative (id::AtomID const &id, pose::Pose const &pose, kinematics::DomainMap const &domain_map, ScoreFunction const &sfxn, EnergyMap const &weights, Vector &F1, Vector &F2) const
 called during gradient-based minimization inside dfunc
virtual void indicate_required_context_graphs (utility::vector1< bool > &) const
 Chainbreak Energy is context independent and thus indicates that no context graphs need to be maintained by class Energies.
virtual core::Size version () const
 Return the version of the energy method.

Detailed Description

ChainbreakEnergy class iterates across all residues in finalize() and determines the penalty between residues i and i+1 by how much their psueduo atoms do not align.


Member Typedef Documentation


Constructor & Destructor Documentation

core::scoring::methods::ChainbreakEnergy::ChainbreakEnergy ( )

Referenced by clone().


Member Function Documentation

virtual EnergyMethodOP core::scoring::methods::ChainbreakEnergy::clone ( ) const [inline, virtual]
void core::scoring::methods::ChainbreakEnergy::eval_atom_derivative ( id::AtomID const &  id,
pose::Pose const &  pose,
kinematics::DomainMap const &  domain_map,
ScoreFunction const &  sfxn,
EnergyMap const &  weights,
Vector F1,
Vector F2 
) const [virtual]
void core::scoring::methods::ChainbreakEnergy::finalize_total_energy ( pose::Pose pose,
ScoreFunction const &  ,
EnergyMap totals 
) const [virtual]
void core::scoring::methods::ChainbreakEnergy::indicate_required_context_graphs ( utility::vector1< bool > &  ) const [virtual]

Chainbreak Energy is context independent and thus indicates that no context graphs need to be maintained by class Energies.

Implements core::scoring::methods::EnergyMethod.

core::Size core::scoring::methods::ChainbreakEnergy::version ( ) const [virtual]

Return the version of the energy method.

Implements core::scoring::methods::EnergyMethod.


The documentation for this class was generated from the following files:
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