Rosetta 3.4
Public Member Functions
protocols::filters::Filter Class Reference

#include <Filter.hh>

Inherits utility::pointer::ReferenceCount.

Inherited by protocols::docking::DockingHighResFilter, protocols::docking::DockingLowResFilter, protocols::enzdes::DiffAtomSasaFilter, protocols::enzdes::EnzdesScorefileFilter, protocols::enzdes::EnzScoreFilter, protocols::enzdes::LigBurialFilter, protocols::enzdes::LigDSasaFilter, protocols::enzdes::LigInterfaceEnergyFilter, protocols::enzdes::RepackWithoutLigandFilter, protocols::filters::CombinedFilter, protocols::filters::CompleteConnectionsFilter, protocols::filters::CompoundFilter, protocols::filters::ContingentFilter, protocols::filters::FalseFilter, protocols::filters::HeavyAtomFilter, protocols::filters::MoveBeforeFilter, protocols::filters::StochasticFilter, protocols::filters::TimeFilter, protocols::filters::TrueFilter, protocols::fldsgn::filters::CoreDunbrackFilter, protocols::fldsgn::filters::FragQualFilter, protocols::fldsgn::filters::HelixKinkFilter, protocols::fldsgn::filters::HelixPairingFilter, protocols::fldsgn::filters::HSSTripletFilter, protocols::fldsgn::filters::InterlockingAromaFilter, protocols::fldsgn::filters::NcontactsFilter, protocols::fldsgn::filters::ParallelBetaPairingPreferenceFilter, protocols::fldsgn::filters::SecondaryStructureFilter, protocols::fldsgn::filters::SheetTopologyFilter, protocols::ligand_docking::AtomCountFilter, protocols::ligand_docking::CompleteConnectionsFilter, protocols::ligand_docking::HBondAcceptorFilter, protocols::ligand_docking::HBondDonorFilter, protocols::ligand_docking::HeavyAtomFilter, protocols::protein_interface_design::AlaScan, protocols::protein_interface_design::BuriedUnsatHbondFilter, protocols::protein_interface_design::DdgFilter, protocols::protein_interface_design::EnergyPerResidueFilter, protocols::protein_interface_design::filters::AverageDegreeFilter, protocols::protein_interface_design::filters::BindingStrainFilter, protocols::protein_interface_design::filters::BoltzmannFilter, protocols::protein_interface_design::filters::DeltaFilter, protocols::protein_interface_design::filters::DesignableResiduesFilter, protocols::protein_interface_design::filters::DisulfideFilter, protocols::protein_interface_design::filters::FilterScanFilter, protocols::protein_interface_design::filters::HbondsToResidueFilter, protocols::protein_interface_design::filters::InterfaceHolesFilter, protocols::protein_interface_design::filters::RelativePoseFilter, protocols::protein_interface_design::filters::RelativeSegmentFilter, protocols::protein_interface_design::filters::RmsdFilter, protocols::protein_interface_design::filters::SequenceRecoveryFilter, protocols::protein_interface_design::filters::StubScoreFilter, protocols::protein_interface_design::filters::Torsion, protocols::protein_interface_design::HbondsToResidueFilter, protocols::protein_interface_design::InterfaceSasaFilter, protocols::protein_interface_design::NeighborTypeFilter, protocols::protein_interface_design::ResidueBurialFilter, protocols::protein_interface_design::ResidueDistanceFilter, protocols::protein_interface_design::ResiduesInInterfaceFilter, protocols::protein_interface_design::ScoreTypeFilter, protocols::protein_interface_design::TerminusDistanceFilter, protocols::simple_filters::AbinitioBaseFilter, protocols::simple_filters::AlaScan, protocols::simple_filters::AtomicContactFilter, protocols::simple_filters::AtomicDistanceFilter, protocols::simple_filters::BuriedUnsatHbondFilter, protocols::simple_filters::ConservedPosMutationFilter, protocols::simple_filters::DdgFilter, protocols::simple_filters::EnergyPerResidueFilter, protocols::simple_filters::HolesFilter, protocols::simple_filters::InterfaceSasaFilter, protocols::simple_filters::NeighborTypeFilter, protocols::simple_filters::PackerNeighborGraphFilter, protocols::simple_filters::PackStatFilter, protocols::simple_filters::PDDFScoreFilter, protocols::simple_filters::ResidueBurialFilter, protocols::simple_filters::ResidueDistanceFilter, protocols::simple_filters::ResiduesInInterfaceFilter, protocols::simple_filters::RotamerBoltzmannWeight, protocols::simple_filters::SAXSScoreFilter, protocols::simple_filters::ScoreCutoffFilter, protocols::simple_filters::ScoreTypeFilter, protocols::simple_filters::ShapeComplementarityFilter, and protocols::simple_filters::TerminusDistanceFilter.

Collaboration diagram for protocols::filters::Filter:
Collaboration graph
[legend]

List of all members.

Public Member Functions

 Filter ()
 Filter (std::string const &)
 Filter (Filter const &)
virtual ~Filter ()
virtual void report (std::ostream &, core::pose::Pose const &) const
virtual core::Real report_sm (core::pose::Pose const &) const
 used to report filter internals through a score or silent file
virtual std::string get_type () const
std::string get_user_defined_name () const
void set_user_defined_name (std::string const &name)
virtual void clear ()
 used to clear internal variables if needed. Using fresh_instance is preferred since it's a pure virtual
virtual void parse_my_tag (utility::tag::TagPtr const, moves::DataMap &, Filters_map const &, moves::Movers_map const &, core::pose::Pose const &)
virtual FilterOP clone () const =0
virtual FilterOP fresh_instance () const =0
virtual bool apply (core::pose::Pose const &pose) const =0
 Returns true if the given pose passes the filter, false otherwise.
virtual std::string name () const

Constructor & Destructor Documentation

protocols::filters::Filter::Filter ( )
protocols::filters::Filter::Filter ( std::string const &  type)
protocols::filters::Filter::Filter ( Filter const &  init)
protocols::filters::Filter::~Filter ( ) [virtual]

Member Function Documentation

virtual bool protocols::filters::Filter::apply ( core::pose::Pose const &  pose) const [pure virtual]

Returns true if the given pose passes the filter, false otherwise.

Implemented in protocols::docking::DockingLowResFilter, protocols::docking::DockingHighResFilter, protocols::enzdes::LigDSasaFilter, protocols::enzdes::LigBurialFilter, protocols::enzdes::LigInterfaceEnergyFilter, protocols::enzdes::EnzScoreFilter, protocols::enzdes::DiffAtomSasaFilter, protocols::enzdes::RepackWithoutLigandFilter, protocols::enzdes::EnzdesScorefileFilter, protocols::filters::TrueFilter, protocols::filters::FalseFilter, protocols::filters::StochasticFilter, protocols::filters::CompoundFilter, protocols::filters::CombinedFilter, protocols::filters::MoveBeforeFilter, protocols::filters::CompleteConnectionsFilter, protocols::filters::ContingentFilter, protocols::filters::HeavyAtomFilter, protocols::filters::TimeFilter, protocols::fldsgn::filters::CoreDunbrackFilter, protocols::fldsgn::filters::FragQualFilter, protocols::fldsgn::filters::HelixKinkFilter, protocols::fldsgn::filters::HelixPairingFilter, protocols::fldsgn::filters::HSSTripletFilter, protocols::fldsgn::filters::InterlockingAromaFilter, protocols::fldsgn::filters::NcontactsFilter, protocols::fldsgn::filters::ParallelBetaPairingPreferenceFilter, protocols::fldsgn::filters::SecondaryStructureFilter, protocols::fldsgn::filters::SheetTopologyFilter, protocols::ligand_docking::AtomCountFilter, protocols::ligand_docking::CompleteConnectionsFilter, protocols::ligand_docking::HBondAcceptorFilter, protocols::ligand_docking::HBondDonorFilter, protocols::ligand_docking::HeavyAtomFilter, protocols::protein_interface_design::ResiduesInInterfaceFilter, protocols::protein_interface_design::AlaScan, protocols::protein_interface_design::ScoreTypeFilter, protocols::protein_interface_design::InterfaceSasaFilter, protocols::protein_interface_design::NeighborTypeFilter, protocols::protein_interface_design::ResidueBurialFilter, protocols::protein_interface_design::ResidueDistanceFilter, protocols::protein_interface_design::DdgFilter, protocols::protein_interface_design::HbondsToResidueFilter, protocols::protein_interface_design::EnergyPerResidueFilter, protocols::protein_interface_design::BuriedUnsatHbondFilter, protocols::protein_interface_design::TerminusDistanceFilter, protocols::protein_interface_design::filters::AverageDegreeFilter, protocols::protein_interface_design::filters::BindingStrainFilter, protocols::protein_interface_design::filters::BoltzmannFilter, protocols::protein_interface_design::filters::DeltaFilter, protocols::protein_interface_design::filters::DesignableResiduesFilter, protocols::protein_interface_design::filters::DisulfideFilter, protocols::protein_interface_design::filters::FilterScanFilter, protocols::protein_interface_design::filters::HbondsToResidueFilter, protocols::protein_interface_design::filters::InterfaceHolesFilter, protocols::protein_interface_design::filters::RelativePoseFilter, protocols::protein_interface_design::filters::RelativeSegmentFilter, protocols::protein_interface_design::filters::RmsdFilter, protocols::protein_interface_design::filters::SequenceRecoveryFilter, protocols::protein_interface_design::filters::StubScoreFilter, protocols::protein_interface_design::filters::Torsion, protocols::simple_filters::AbinitioBaseFilter, protocols::simple_filters::AlaScan, protocols::simple_filters::AtomicContactFilter, protocols::simple_filters::AtomicDistanceFilter, protocols::simple_filters::BuriedUnsatHbondFilter, protocols::simple_filters::COFilter, protocols::simple_filters::ConservedPosMutationFilter, protocols::simple_filters::DdgFilter, protocols::simple_filters::EnergyPerResidueFilter, protocols::simple_filters::HolesFilter, protocols::simple_filters::InterfaceSasaFilter, protocols::simple_filters::NeighborTypeFilter, protocols::simple_filters::PackerNeighborGraphFilter, protocols::simple_filters::PackStatFilter, protocols::simple_filters::PDDFScoreFilter, protocols::simple_filters::ResidueBurialFilter, protocols::simple_filters::ResidueDistanceFilter, protocols::simple_filters::ResiduesInInterfaceFilter, protocols::simple_filters::RGFilter, protocols::simple_filters::RotamerBoltzmannWeight, protocols::simple_filters::SAXSScoreFilter, protocols::simple_filters::ScoreCutoffFilter, protocols::simple_filters::ScoreTypeFilter, protocols::simple_filters::ShapeComplementarityFilter, protocols::simple_filters::SheetFilter, and protocols::simple_filters::TerminusDistanceFilter.

virtual void protocols::filters::Filter::clear ( ) [inline, virtual]

used to clear internal variables if needed. Using fresh_instance is preferred since it's a pure virtual

Reimplemented in protocols::filters::CompoundFilter, protocols::protein_interface_design::NeighborTypeFilter, and protocols::simple_filters::NeighborTypeFilter.

Referenced by protocols::protein_interface_design::movers::PlaceStubMover::parse_my_tag().

virtual FilterOP protocols::filters::Filter::clone ( ) const [pure virtual]

Implemented in protocols::docking::DockingLowResFilter, protocols::docking::DockingHighResFilter, protocols::enzdes::LigDSasaFilter, protocols::enzdes::LigBurialFilter, protocols::enzdes::LigInterfaceEnergyFilter, protocols::enzdes::EnzScoreFilter, protocols::enzdes::DiffAtomSasaFilter, protocols::enzdes::RepackWithoutLigandFilter, protocols::enzdes::EnzdesScorefileFilter, protocols::filters::TrueFilter, protocols::filters::FalseFilter, protocols::filters::StochasticFilter, protocols::filters::CompoundFilter, protocols::filters::CombinedFilter, protocols::filters::MoveBeforeFilter, protocols::filters::CompleteConnectionsFilter, protocols::filters::ContingentFilter, protocols::filters::HeavyAtomFilter, protocols::filters::TimeFilter, protocols::fldsgn::filters::CoreDunbrackFilter, protocols::fldsgn::filters::FragQualFilter, protocols::fldsgn::filters::HelixKinkFilter, protocols::fldsgn::filters::HelixPairingFilter, protocols::fldsgn::filters::HSSTripletFilter, protocols::fldsgn::filters::InterlockingAromaFilter, protocols::fldsgn::filters::NcontactsFilter, protocols::fldsgn::filters::ParallelBetaPairingPreferenceFilter, protocols::fldsgn::filters::SecondaryStructureFilter, protocols::fldsgn::filters::SheetTopologyFilter, protocols::ligand_docking::AtomCountFilter, protocols::ligand_docking::CompleteConnectionsFilter, protocols::ligand_docking::HBondAcceptorFilter, protocols::ligand_docking::HBondDonorFilter, protocols::ligand_docking::HeavyAtomFilter, protocols::protein_interface_design::ResiduesInInterfaceFilter, protocols::protein_interface_design::AlaScan, protocols::protein_interface_design::ScoreTypeFilter, protocols::protein_interface_design::InterfaceSasaFilter, protocols::protein_interface_design::NeighborTypeFilter, protocols::protein_interface_design::ResidueBurialFilter, protocols::protein_interface_design::ResidueDistanceFilter, protocols::protein_interface_design::DdgFilter, protocols::protein_interface_design::HbondsToResidueFilter, protocols::protein_interface_design::EnergyPerResidueFilter, protocols::protein_interface_design::BuriedUnsatHbondFilter, protocols::protein_interface_design::TerminusDistanceFilter, protocols::protein_interface_design::filters::AverageDegreeFilter, protocols::protein_interface_design::filters::BindingStrainFilter, protocols::protein_interface_design::filters::BoltzmannFilter, protocols::protein_interface_design::filters::DeltaFilter, protocols::protein_interface_design::filters::DesignableResiduesFilter, protocols::protein_interface_design::filters::DisulfideFilter, protocols::protein_interface_design::filters::FilterScanFilter, protocols::protein_interface_design::filters::HbondsToResidueFilter, protocols::protein_interface_design::filters::InterfaceHolesFilter, protocols::protein_interface_design::filters::RelativePoseFilter, protocols::protein_interface_design::filters::RelativeSegmentFilter, protocols::protein_interface_design::filters::RmsdFilter, protocols::protein_interface_design::filters::SequenceRecoveryFilter, protocols::protein_interface_design::filters::StubScoreFilter, protocols::protein_interface_design::filters::Torsion, protocols::simple_filters::AbinitioBaseFilter, protocols::simple_filters::AlaScan, protocols::simple_filters::AtomicContactFilter, protocols::simple_filters::AtomicDistanceFilter, protocols::simple_filters::BuriedUnsatHbondFilter, protocols::simple_filters::COFilter, protocols::simple_filters::ConservedPosMutationFilter, protocols::simple_filters::DdgFilter, protocols::simple_filters::EnergyPerResidueFilter, protocols::simple_filters::HolesFilter, protocols::simple_filters::InterfaceSasaFilter, protocols::simple_filters::NeighborTypeFilter, protocols::simple_filters::PackerNeighborGraphFilter, protocols::simple_filters::PackStatFilter, protocols::simple_filters::PDDFScoreFilter, protocols::simple_filters::ResidueBurialFilter, protocols::simple_filters::ResidueDistanceFilter, protocols::simple_filters::ResiduesInInterfaceFilter, protocols::simple_filters::RGFilter, protocols::simple_filters::RotamerBoltzmannWeight, protocols::simple_filters::SAXSScoreFilter, protocols::simple_filters::ScoreCutoffFilter, protocols::simple_filters::ScoreTypeFilter, protocols::simple_filters::ShapeComplementarityFilter, protocols::simple_filters::SheetFilter, and protocols::simple_filters::TerminusDistanceFilter.

virtual FilterOP protocols::filters::Filter::fresh_instance ( ) const [pure virtual]

Implemented in protocols::docking::DockingLowResFilter, protocols::docking::DockingHighResFilter, protocols::enzdes::LigDSasaFilter, protocols::enzdes::LigBurialFilter, protocols::enzdes::LigInterfaceEnergyFilter, protocols::enzdes::EnzScoreFilter, protocols::enzdes::DiffAtomSasaFilter, protocols::enzdes::RepackWithoutLigandFilter, protocols::enzdes::EnzdesScorefileFilter, protocols::filters::TrueFilter, protocols::filters::FalseFilter, protocols::filters::StochasticFilter, protocols::filters::CompoundFilter, protocols::filters::CombinedFilter, protocols::filters::MoveBeforeFilter, protocols::filters::CompleteConnectionsFilter, protocols::filters::ContingentFilter, protocols::filters::HeavyAtomFilter, protocols::filters::TimeFilter, protocols::fldsgn::filters::CoreDunbrackFilter, protocols::fldsgn::filters::FragQualFilter, protocols::fldsgn::filters::HelixKinkFilter, protocols::fldsgn::filters::HelixPairingFilter, protocols::fldsgn::filters::HSSTripletFilter, protocols::fldsgn::filters::InterlockingAromaFilter, protocols::fldsgn::filters::NcontactsFilter, protocols::fldsgn::filters::ParallelBetaPairingPreferenceFilter, protocols::fldsgn::filters::SecondaryStructureFilter, protocols::fldsgn::filters::SheetTopologyFilter, protocols::ligand_docking::AtomCountFilter, protocols::ligand_docking::CompleteConnectionsFilter, protocols::ligand_docking::HBondAcceptorFilter, protocols::ligand_docking::HBondDonorFilter, protocols::ligand_docking::HeavyAtomFilter, protocols::protein_interface_design::ResiduesInInterfaceFilter, protocols::protein_interface_design::AlaScan, protocols::protein_interface_design::ScoreTypeFilter, protocols::protein_interface_design::InterfaceSasaFilter, protocols::protein_interface_design::NeighborTypeFilter, protocols::protein_interface_design::ResidueBurialFilter, protocols::protein_interface_design::ResidueDistanceFilter, protocols::protein_interface_design::DdgFilter, protocols::protein_interface_design::HbondsToResidueFilter, protocols::protein_interface_design::EnergyPerResidueFilter, protocols::protein_interface_design::BuriedUnsatHbondFilter, protocols::protein_interface_design::TerminusDistanceFilter, protocols::protein_interface_design::filters::AverageDegreeFilter, protocols::protein_interface_design::filters::BindingStrainFilter, protocols::protein_interface_design::filters::BoltzmannFilter, protocols::protein_interface_design::filters::DeltaFilter, protocols::protein_interface_design::filters::DesignableResiduesFilter, protocols::protein_interface_design::filters::DisulfideFilter, protocols::protein_interface_design::filters::FilterScanFilter, protocols::protein_interface_design::filters::HbondsToResidueFilter, protocols::protein_interface_design::filters::InterfaceHolesFilter, protocols::protein_interface_design::filters::RelativePoseFilter, protocols::protein_interface_design::filters::RelativeSegmentFilter, protocols::protein_interface_design::filters::RmsdFilter, protocols::protein_interface_design::filters::SequenceRecoveryFilter, protocols::protein_interface_design::filters::StubScoreFilter, protocols::protein_interface_design::filters::Torsion, protocols::simple_filters::AbinitioBaseFilter, protocols::simple_filters::AlaScan, protocols::simple_filters::AtomicContactFilter, protocols::simple_filters::AtomicDistanceFilter, protocols::simple_filters::BuriedUnsatHbondFilter, protocols::simple_filters::COFilter, protocols::simple_filters::ConservedPosMutationFilter, protocols::simple_filters::DdgFilter, protocols::simple_filters::EnergyPerResidueFilter, protocols::simple_filters::HolesFilter, protocols::simple_filters::InterfaceSasaFilter, protocols::simple_filters::NeighborTypeFilter, protocols::simple_filters::PackerNeighborGraphFilter, protocols::simple_filters::PackStatFilter, protocols::simple_filters::PDDFScoreFilter, protocols::simple_filters::ResidueBurialFilter, protocols::simple_filters::ResidueDistanceFilter, protocols::simple_filters::ResiduesInInterfaceFilter, protocols::simple_filters::RGFilter, protocols::simple_filters::RotamerBoltzmannWeight, protocols::simple_filters::SAXSScoreFilter, protocols::simple_filters::ScoreCutoffFilter, protocols::simple_filters::ScoreTypeFilter, protocols::simple_filters::ShapeComplementarityFilter, protocols::simple_filters::SheetFilter, and protocols::simple_filters::TerminusDistanceFilter.

virtual std::string protocols::filters::Filter::get_type ( ) const [inline, virtual]
std::string protocols::filters::Filter::get_user_defined_name ( ) const [inline]
virtual std::string protocols::filters::Filter::name ( ) const [inline, virtual]
void protocols::filters::Filter::parse_my_tag ( utility::tag::TagPtr const  ,
moves::DataMap ,
Filters_map const &  ,
moves::Movers_map const &  ,
core::pose::Pose const &   
) [virtual]

Reimplemented in protocols::enzdes::LigDSasaFilter, protocols::enzdes::LigBurialFilter, protocols::enzdes::LigInterfaceEnergyFilter, protocols::enzdes::EnzScoreFilter, protocols::enzdes::DiffAtomSasaFilter, protocols::enzdes::RepackWithoutLigandFilter, protocols::enzdes::EnzdesScorefileFilter, protocols::filters::StochasticFilter, protocols::filters::CompoundFilter, protocols::filters::CombinedFilter, protocols::filters::MoveBeforeFilter, protocols::filters::CompleteConnectionsFilter, protocols::filters::ContingentFilter, protocols::filters::HeavyAtomFilter, protocols::filters::TimeFilter, protocols::fldsgn::filters::CoreDunbrackFilter, protocols::fldsgn::filters::FragQualFilter, protocols::fldsgn::filters::HelixKinkFilter, protocols::fldsgn::filters::HelixPairingFilter, protocols::fldsgn::filters::HSSTripletFilter, protocols::fldsgn::filters::InterlockingAromaFilter, protocols::fldsgn::filters::NcontactsFilter, protocols::fldsgn::filters::ParallelBetaPairingPreferenceFilter, protocols::fldsgn::filters::SecondaryStructureFilter, protocols::fldsgn::filters::SheetTopologyFilter, protocols::ligand_docking::AtomCountFilter, protocols::ligand_docking::CompleteConnectionsFilter, protocols::ligand_docking::HBondAcceptorFilter, protocols::ligand_docking::HBondDonorFilter, protocols::ligand_docking::HeavyAtomFilter, protocols::protein_interface_design::ResiduesInInterfaceFilter, protocols::protein_interface_design::AlaScan, protocols::protein_interface_design::ScoreTypeFilter, protocols::protein_interface_design::InterfaceSasaFilter, protocols::protein_interface_design::NeighborTypeFilter, protocols::protein_interface_design::ResidueBurialFilter, protocols::protein_interface_design::ResidueDistanceFilter, protocols::protein_interface_design::DdgFilter, protocols::protein_interface_design::HbondsToResidueFilter, protocols::protein_interface_design::EnergyPerResidueFilter, protocols::protein_interface_design::BuriedUnsatHbondFilter, protocols::protein_interface_design::TerminusDistanceFilter, protocols::protein_interface_design::filters::AverageDegreeFilter, protocols::protein_interface_design::filters::BindingStrainFilter, protocols::protein_interface_design::filters::BoltzmannFilter, protocols::protein_interface_design::filters::DeltaFilter, protocols::protein_interface_design::filters::DesignableResiduesFilter, protocols::protein_interface_design::filters::DisulfideFilter, protocols::protein_interface_design::filters::FilterScanFilter, protocols::protein_interface_design::filters::InterfaceHolesFilter, protocols::protein_interface_design::filters::RelativePoseFilter, protocols::protein_interface_design::filters::RmsdFilter, protocols::protein_interface_design::filters::SequenceRecoveryFilter, protocols::protein_interface_design::filters::StubScoreFilter, protocols::protein_interface_design::filters::Torsion, protocols::simple_filters::AlaScan, protocols::simple_filters::AtomicContactFilter, protocols::simple_filters::AtomicDistanceFilter, protocols::simple_filters::BuriedUnsatHbondFilter, protocols::simple_filters::ConservedPosMutationFilter, protocols::simple_filters::DdgFilter, protocols::simple_filters::EnergyPerResidueFilter, protocols::simple_filters::HolesFilter, protocols::simple_filters::InterfaceSasaFilter, protocols::simple_filters::NeighborTypeFilter, protocols::simple_filters::PackStatFilter, protocols::simple_filters::ResidueBurialFilter, protocols::simple_filters::ResidueDistanceFilter, protocols::simple_filters::ResiduesInInterfaceFilter, protocols::simple_filters::RotamerBoltzmannWeight, protocols::simple_filters::ScoreCutoffFilter, protocols::simple_filters::ScoreTypeFilter, protocols::simple_filters::ShapeComplementarityFilter, and protocols::simple_filters::TerminusDistanceFilter.

virtual void protocols::filters::Filter::report ( std::ostream &  ,
core::pose::Pose const &   
) const [inline, virtual]

Reimplemented in protocols::docking::DockingLowResFilter, protocols::enzdes::LigDSasaFilter, protocols::enzdes::LigBurialFilter, protocols::enzdes::LigInterfaceEnergyFilter, protocols::enzdes::EnzScoreFilter, protocols::enzdes::DiffAtomSasaFilter, protocols::enzdes::RepackWithoutLigandFilter, protocols::filters::StochasticFilter, protocols::filters::CompoundFilter, protocols::filters::CombinedFilter, protocols::filters::MoveBeforeFilter, protocols::filters::ContingentFilter, protocols::filters::TimeFilter, protocols::fldsgn::filters::CoreDunbrackFilter, protocols::fldsgn::filters::FragQualFilter, protocols::fldsgn::filters::InterlockingAromaFilter, protocols::fldsgn::filters::NcontactsFilter, protocols::fldsgn::filters::ParallelBetaPairingPreferenceFilter, protocols::protein_interface_design::ResiduesInInterfaceFilter, protocols::protein_interface_design::AlaScan, protocols::protein_interface_design::ScoreTypeFilter, protocols::protein_interface_design::InterfaceSasaFilter, protocols::protein_interface_design::NeighborTypeFilter, protocols::protein_interface_design::ResidueBurialFilter, protocols::protein_interface_design::ResidueDistanceFilter, protocols::protein_interface_design::DdgFilter, protocols::protein_interface_design::HbondsToResidueFilter, protocols::protein_interface_design::EnergyPerResidueFilter, protocols::protein_interface_design::BuriedUnsatHbondFilter, protocols::protein_interface_design::TerminusDistanceFilter, protocols::protein_interface_design::filters::AverageDegreeFilter, protocols::protein_interface_design::filters::BindingStrainFilter, protocols::protein_interface_design::filters::BoltzmannFilter, protocols::protein_interface_design::filters::DeltaFilter, protocols::protein_interface_design::filters::DesignableResiduesFilter, protocols::protein_interface_design::filters::DisulfideFilter, protocols::protein_interface_design::filters::FilterScanFilter, protocols::protein_interface_design::filters::HbondsToResidueFilter, protocols::protein_interface_design::filters::InterfaceHolesFilter, protocols::protein_interface_design::filters::RelativePoseFilter, protocols::protein_interface_design::filters::RelativeSegmentFilter, protocols::protein_interface_design::filters::RmsdFilter, protocols::protein_interface_design::filters::SequenceRecoveryFilter, protocols::protein_interface_design::filters::StubScoreFilter, protocols::protein_interface_design::filters::Torsion, protocols::simple_filters::AlaScan, protocols::simple_filters::AtomicContactFilter, protocols::simple_filters::AtomicDistanceFilter, protocols::simple_filters::BuriedUnsatHbondFilter, protocols::simple_filters::DdgFilter, protocols::simple_filters::EnergyPerResidueFilter, protocols::simple_filters::HolesFilter, protocols::simple_filters::InterfaceSasaFilter, protocols::simple_filters::NeighborTypeFilter, protocols::simple_filters::ResidueBurialFilter, protocols::simple_filters::ResidueDistanceFilter, protocols::simple_filters::ResiduesInInterfaceFilter, protocols::simple_filters::RotamerBoltzmannWeight, protocols::simple_filters::ScoreCutoffFilter, protocols::simple_filters::ScoreTypeFilter, and protocols::simple_filters::TerminusDistanceFilter.

virtual core::Real protocols::filters::Filter::report_sm ( core::pose::Pose const &  ) const [inline, virtual]

used to report filter internals through a score or silent file

Reimplemented in protocols::enzdes::LigDSasaFilter, protocols::enzdes::LigBurialFilter, protocols::enzdes::LigInterfaceEnergyFilter, protocols::enzdes::EnzScoreFilter, protocols::enzdes::DiffAtomSasaFilter, protocols::enzdes::RepackWithoutLigandFilter, protocols::filters::CompoundFilter, protocols::filters::CombinedFilter, protocols::filters::MoveBeforeFilter, protocols::filters::ContingentFilter, protocols::filters::TimeFilter, protocols::fldsgn::filters::CoreDunbrackFilter, protocols::fldsgn::filters::FragQualFilter, protocols::fldsgn::filters::HelixPairingFilter, protocols::fldsgn::filters::HSSTripletFilter, protocols::fldsgn::filters::InterlockingAromaFilter, protocols::fldsgn::filters::NcontactsFilter, protocols::fldsgn::filters::ParallelBetaPairingPreferenceFilter, protocols::protein_interface_design::ResiduesInInterfaceFilter, protocols::protein_interface_design::AlaScan, protocols::protein_interface_design::ScoreTypeFilter, protocols::protein_interface_design::InterfaceSasaFilter, protocols::protein_interface_design::NeighborTypeFilter, protocols::protein_interface_design::ResidueBurialFilter, protocols::protein_interface_design::ResidueDistanceFilter, protocols::protein_interface_design::DdgFilter, protocols::protein_interface_design::HbondsToResidueFilter, protocols::protein_interface_design::EnergyPerResidueFilter, protocols::protein_interface_design::BuriedUnsatHbondFilter, protocols::protein_interface_design::TerminusDistanceFilter, protocols::protein_interface_design::filters::AverageDegreeFilter, protocols::protein_interface_design::filters::BindingStrainFilter, protocols::protein_interface_design::filters::BoltzmannFilter, protocols::protein_interface_design::filters::DeltaFilter, protocols::protein_interface_design::filters::DesignableResiduesFilter, protocols::protein_interface_design::filters::DisulfideFilter, protocols::protein_interface_design::filters::FilterScanFilter, protocols::protein_interface_design::filters::HbondsToResidueFilter, protocols::protein_interface_design::filters::InterfaceHolesFilter, protocols::protein_interface_design::filters::RelativePoseFilter, protocols::protein_interface_design::filters::RelativeSegmentFilter, protocols::protein_interface_design::filters::RmsdFilter, protocols::protein_interface_design::filters::SequenceRecoveryFilter, protocols::protein_interface_design::filters::StubScoreFilter, protocols::protein_interface_design::filters::Torsion, protocols::simple_filters::AlaScan, protocols::simple_filters::AtomicContactFilter, protocols::simple_filters::AtomicDistanceFilter, protocols::simple_filters::BuriedUnsatHbondFilter, protocols::simple_filters::DdgFilter, protocols::simple_filters::EnergyPerResidueFilter, protocols::simple_filters::HolesFilter, protocols::simple_filters::InterfaceSasaFilter, protocols::simple_filters::NeighborTypeFilter, protocols::simple_filters::PackStatFilter, protocols::simple_filters::ResidueBurialFilter, protocols::simple_filters::ResidueDistanceFilter, protocols::simple_filters::ResiduesInInterfaceFilter, protocols::simple_filters::RotamerBoltzmannWeight, protocols::simple_filters::ScoreTypeFilter, protocols::simple_filters::ShapeComplementarityFilter, and protocols::simple_filters::TerminusDistanceFilter.

void protocols::filters::Filter::set_user_defined_name ( std::string const &  name) [inline]

References name().


The documentation for this class was generated from the following files:
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