Rosetta 3.4
Public Types | Public Member Functions
protocols::protein_interface_design::movers::PlacementAuctionMover Class Reference

#include <PlacementAuctionMover.hh>

Inheritance diagram for protocols::protein_interface_design::movers::PlacementAuctionMover:
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Collaboration diagram for protocols::protein_interface_design::movers::PlacementAuctionMover:
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List of all members.

Public Types

typedef std::pair
< protocols::hotspot_hashing::HotspotStubSetOP,
std::pair
< protocols::hotspot_hashing::HotspotStubOP,
core::Size > > 
StubSetStubPos
typedef std::pair
< protocols::hotspot_hashing::HotspotStubSetOP,
protocols::hotspot_hashing::HotspotStubOP
StubsetStubPair
typedef std::pair< core::Real,
std::pair< core::Size,
StubsetStubPair > > 
ResidueAuctionItem
typedef std::multimap
< core::Real, std::pair
< core::Size, StubsetStubPair > > 
ResidueAuction
typedef ResidueAuction::iterator iterator
typedef
ResidueAuction::const_iterator 
const_iterator

Public Member Functions

 PlacementAuctionMover ()
void apply (core::pose::Pose &pose)
 a dummy apply so that instantiation of this baseclass would be possible.
virtual std::string get_name () const
 Each derived class must specify its name. The class name.
ResidueAuction auction_results () const
protocols::moves::MoverOP clone () const
 clone has to be overridden only if clone invocation is expected.
protocols::moves::MoverOP fresh_instance () const
 this is like clone(), except it generates a new mover object freshly created with the default ctor. This function _should_ be pure virtual but that would disrupt the code base; MAKE SURE YOU DEFINE IT if you want to have your mover be a protocol handed to the job distributor (august 08 vintage).
void insert (ResidueAuctionItem const &item)
core::Size size () const
void erase (iterator it)
void clear ()
iterator begin ()
iterator end ()
const_iterator begin () const
const_iterator end () const
virtual void parse_my_tag (utility::tag::TagPtr const tag, protocols::moves::DataMap &, protocols::filters::Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &)
 Called by MoverFactory when constructing new Movers. Takes care of the specific mover's parsing.
void host_chain (core::Size const hc)
void max_cb_cb_dist (core::Real const mccd)
void cb_force (core::Real const cf)
void stub_sets (utility::vector1< StubSetStubPos > const &vec)
utility::vector1
< StubSetStubPos > const & 
stub_sets () const
utility::vector1
< StubSetStubPos > & 
stub_sets ()
 ~PlacementAuctionMover ()

Member Typedef Documentation


Constructor & Destructor Documentation

protocols::protein_interface_design::movers::PlacementAuctionMover::PlacementAuctionMover ( )

Referenced by clone().

protocols::protein_interface_design::movers::PlacementAuctionMover::~PlacementAuctionMover ( )

Member Function Documentation

void protocols::protein_interface_design::movers::PlacementAuctionMover::apply ( core::pose::Pose ) [virtual]
PlacementAuctionMover::ResidueAuction protocols::protein_interface_design::movers::PlacementAuctionMover::auction_results ( ) const

Referenced by apply().

PlacementAuctionMover::iterator protocols::protein_interface_design::movers::PlacementAuctionMover::begin ( )

Referenced by apply().

PlacementAuctionMover::const_iterator protocols::protein_interface_design::movers::PlacementAuctionMover::begin ( ) const
void protocols::protein_interface_design::movers::PlacementAuctionMover::cb_force ( core::Real const  cf)
void protocols::protein_interface_design::movers::PlacementAuctionMover::clear ( )
protocols::moves::MoverOP protocols::protein_interface_design::movers::PlacementAuctionMover::clone ( ) const [virtual]

clone has to be overridden only if clone invocation is expected.

clone is meant to return an OP'ed deep copy of this object. This really should be a pure virtual in the base class, but adding pure virtuals to Mover would massively disrupt the code. This default implementation crashes at runtime instead of compiletime if you try to call it. If this code is causing you problems, your Mover needs to override this function.

Implements protocols::simple_moves::DesignRepackMover.

References PlacementAuctionMover().

PlacementAuctionMover::iterator protocols::protein_interface_design::movers::PlacementAuctionMover::end ( )

Referenced by apply().

PlacementAuctionMover::const_iterator protocols::protein_interface_design::movers::PlacementAuctionMover::end ( ) const
void protocols::protein_interface_design::movers::PlacementAuctionMover::erase ( PlacementAuctionMover::iterator  it)

Referenced by apply().

protocols::moves::MoverOP protocols::protein_interface_design::movers::PlacementAuctionMover::fresh_instance ( ) const [inline, virtual]

this is like clone(), except it generates a new mover object freshly created with the default ctor. This function _should_ be pure virtual but that would disrupt the code base; MAKE SURE YOU DEFINE IT if you want to have your mover be a protocol handed to the job distributor (august 08 vintage).

fresh_instance is meant to return a new object of this class, created with the default constructor. This really should be a pure virtual in the base class, but adding pure virtuals to Mover would massively disrupt the code. This default implementation crashes at runtime instead of compiletime if you try to call it. If this code is causing you problems, your Mover needs to override this function. This is used by the August 08 job distributor.

Implements protocols::simple_moves::DesignRepackMover.

std::string protocols::protein_interface_design::movers::PlacementAuctionMover::get_name ( ) const [virtual]

Each derived class must specify its name. The class name.

Reimplemented from protocols::simple_moves::DesignRepackMover.

References protocols::protein_interface_design::movers::PlacementAuctionMoverCreator::mover_name().

void protocols::protein_interface_design::movers::PlacementAuctionMover::host_chain ( core::Size const  hc)
void protocols::protein_interface_design::movers::PlacementAuctionMover::insert ( PlacementAuctionMover::ResidueAuctionItem const &  item)

Referenced by apply().

void protocols::protein_interface_design::movers::PlacementAuctionMover::max_cb_cb_dist ( core::Real const  mccd)
void protocols::protein_interface_design::movers::PlacementAuctionMover::parse_my_tag ( utility::tag::TagPtr const  tag,
protocols::moves::DataMap data,
protocols::filters::Filters_map const &  filters,
protocols::moves::Movers_map const &  movers,
core::pose::Pose const &  pose 
) [virtual]

Called by MoverFactory when constructing new Movers. Takes care of the specific mover's parsing.

Some movers need not be parsed, so we shouldn't stop executions. This, however, calls attention to the lack of this method, which could be due to something as silly as a wrong parameters definition.

Reimplemented from protocols::simple_moves::DesignRepackMover.

References protocols::protein_interface_design::movers::parse_stub_sets(), and protocols::protein_interface_design::movers::TR().

core::Size protocols::protein_interface_design::movers::PlacementAuctionMover::size ( ) const

Referenced by apply().

utility::vector1< protocols::protein_interface_design::movers::PlacementAuctionMover::StubSetStubPos > const & protocols::protein_interface_design::movers::PlacementAuctionMover::stub_sets ( ) const

Referenced by apply(), and stub_sets().

void protocols::protein_interface_design::movers::PlacementAuctionMover::stub_sets ( utility::vector1< StubSetStubPos > const &  vec)

References stub_sets().

utility::vector1< protocols::protein_interface_design::movers::PlacementAuctionMover::StubSetStubPos > & protocols::protein_interface_design::movers::PlacementAuctionMover::stub_sets ( )

The documentation for this class was generated from the following files:
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