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util.hh File Reference
#include <protocols/docking/types.hh>
#include <core/pose/Pose.fwd.hh>
#include <utility/vector1.fwd.hh>
#include <map>
#include <utility/sql_database/DatabaseSessionManager.fwd.hh>

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::docking
 

Constant Groups

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::docking
 

Functions

void protocols::docking::setup_foldtree (Pose &pose, string const &partner_chainID, DockJumps &movable_jumps)
 Setup foldtree for across an interface specified by a string for the partner chains (using pdb_chain identification). The foldtree is set up such that the jump points are at the center of masses of the two partners. More...
 
void protocols::docking::setup_foldtree (core::pose::Pose &pose, core::Size interface_id, utility::sql_database::sessionOP db_session, DockJumps &movable_jumps)
 Sets up a docking fold tree based on looking up the interface in a database. More...
 
void protocols::docking::setup_foldtree (core::pose::Pose &pose, std::map< core::Size, utility::vector1< core::Size > > const &partner_to_chains, DockJumps &movable_jumps)
 Sets up a docking fold tree based on a map of which chains are part of which partner. More...
 
void protocols::docking::setup_foldtree (core::pose::Pose &pose, core::Size cutpoint, DockJumps &movable_jumps)
 Sets up a docking fold tree based on user-specified chains for the first and second partner. More...