protocols::ligand_docking::HBondDonorFilter Class Reference

#include <HBondDonorFilter.hh>

Inheritance diagram for protocols::ligand_docking::HBondDonorFilter:

Collaboration diagram for protocols::ligand_docking::HBondDonorFilter:

Public Member Functions
	HBondDonorFilter ()
	HBondDonorFilter (std::string chain, core::Size hbond_donor_limit)
	HBondDonorFilter (HBondDonorFilter const &init)
virtual	~HBondDonorFilter ()
bool	apply (core::pose::Pose const &pose) const
	Returns true if the given pose passes the filter, false otherwise. More...
protocols::filters::FilterOP	clone () const
protocols::filters::FilterOP	fresh_instance () const
void	parse_my_tag (utility::tag::TagPtr const tag, protocols::moves::DataMap &, protocols::filters::Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &reference_pose)
Public Member Functions inherited from protocols::filters::Filter
	Filter ()
	Filter (std::string const &)
	Filter (Filter const &)
virtual	~Filter ()
virtual void	report (std::ostream &, core::pose::Pose const &) const
virtual core::Real	report_sm (core::pose::Pose const &) const
	used to report filter internals through a score or silent file More...
virtual std::string	get_type () const
std::string	get_user_defined_name () const
void	set_user_defined_name (std::string const &name)
virtual void	clear ()
	used to clear internal variables if needed. Using fresh_instance is preferred since it's a pure virtual More...
virtual void	apply (core::io::serialization::PipeMap &pmap)
virtual void	score (core::io::serialization::PipeMap &pmap)
virtual core::Real	score (core::pose::Pose &pose)
virtual void	parse_def (utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks)
virtual std::string	name () const

Private Attributes
std::string	chain_
core::Size	hbond_donor_limit_

Additional Inherited Members
Protected Attributes inherited from protocols::filters::Filter
std::string	scorename_

Constructor & Destructor Documentation

protocols::ligand_docking::HBondDonorFilter::HBondDonorFilter ( )

inline

Referenced by clone(), and fresh_instance().

protocols::ligand_docking::HBondDonorFilter::HBondDonorFilter ( std::string  chain, core::Size  hbond_donor_limit  )

inline

protocols::ligand_docking::HBondDonorFilter::HBondDonorFilter ( HBondDonorFilter const &  init)

inline

virtual protocols::ligand_docking::HBondDonorFilter::~HBondDonorFilter ( )

inlinevirtual

Member Function Documentation

bool protocols::ligand_docking::HBondDonorFilter::apply ( core::pose::Pose const &  pose) const

virtual

Returns true if the given pose passes the filter, false otherwise.

Implements protocols::filters::Filter.

References chain_, core::conformation::Conformation::chain_begin(), core::conformation::Conformation::chain_end(), core::pose::Pose::conformation(), core::sequence::end, core::pose::get_chain_id_from_chain(), hbond_donor_limit_, protocols::ligand_docking::hbond_donor_tracer(), and core::pose::num_hbond_donors().

protocols::filters::FilterOP protocols::ligand_docking::HBondDonorFilter::clone ( ) const

inlinevirtual

Implements protocols::filters::Filter.

References HBondDonorFilter().

protocols::filters::FilterOP protocols::ligand_docking::HBondDonorFilter::fresh_instance ( ) const

inlinevirtual

Implements protocols::filters::Filter.

References HBondDonorFilter().

void protocols::ligand_docking::HBondDonorFilter::parse_my_tag ( utility::tag::TagPtr const  tag, protocols::moves::DataMap &  , protocols::filters::Filters_map const &  , protocols::moves::Movers_map const &  , core::pose::Pose const &  reference_pose  )

virtual

Reimplemented from protocols::filters::Filter.

References chain_, hbond_donor_limit_, and protocols::ligand_docking::hbond_donor_tracer().

Member Data Documentation

std::string protocols::ligand_docking::HBondDonorFilter::chain_

private

Referenced by apply(), and parse_my_tag().

core::Size protocols::ligand_docking::HBondDonorFilter::hbond_donor_limit_

private

Referenced by apply(), and parse_my_tag().

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The documentation for this class was generated from the following files:

• src/protocols/ligand_docking/HBondDonorFilter.hh
• src/protocols/ligand_docking/HBondDonorFilter.cc