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protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD Member List

This is the complete list of members for protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD, including all inherited members.

add(core::io::silent::SilentStruct const &, std::string new_tag="keep_silent_tag")protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
add(core::pose::Pose const &, std::string new_tag)protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
add(ObjexxFCL::FArray2D_double const &, core::Size nres, std::string new_tag)protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
add_pose_to_pool()protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
array_to_farray(core::Size index)protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
array_to_farray(core::Size index, core::Size num_to_add)protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
assign_tag(std::string &new_tag, core::Size optional_id_num)protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSDprivate
broadcast_coords(FArray2D_double &coords)protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSDprivate
broadcast_newest_coords(int num_to_send)protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSDprivate
clear()protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
coords() const protocols::canonical_sampling::mc_convergence_checks::Pool_RMSDinlineprotected
create_comm(int ranks_to_include[], int new_size)protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
evaluate(core::pose::Pose const &, std::string &best_decoy, core::Real &best_rmsd) const protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
evaluate(core::io::silent::SilentStruct const &, std::string &best_decoy, core::Real &best_rmsd) const protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
evaluate(ObjexxFCL::FArray2D_double &, std::string &best_decoy, core::Real &best_rmsd) const protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
evaluate(ObjexxFCL::FArray2D_double &, std::string &best_decoy, core::Real &best_rmsd, core::Size index) const protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
evaluate_and_add(core::pose::Pose const &pose, std::string &best_decoy, core::Real &best_rmsd, core::Real transition_threshold)protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSDvirtual
protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD::evaluate_and_add(ObjexxFCL::FArray2D_double &coords, std::string &best_decoy, core::Real &best_rmsd, core::Real transition_threshold)protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
farray_to_array(core::Size index)protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
farray_to_array(core::Size index, core::Size num_to_add)protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
finalize()protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSDvirtual
get(core::Size index, ObjexxFCL::FArray2D_double &result)protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
get_discovered_out()protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
get_nresidues()protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
get_tag(core::Size index)protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
increment_pool_size(core::Size new_structures)protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSDprivate
initialize()protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSDprivate
is_active_node()protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
is_master_node()protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
master_gather_new_coords()protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSDprivate
master_go()protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
master_node_protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSDstatic
MPIBPool_RMSD(std::string const &silent_file)protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
natom() const protocols::canonical_sampling::mc_convergence_checks::Pool_RMSDinlineprotected
new_decoys_out_protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSDprivate
new_structures_protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSDprivate
nodes_finished_protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSDprivate
npes_protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSDprivate
partition_into_coordinates(double const received_array[], int const size_per_coord[], core::Size num_received, utility::vector1< FArray2D_double > &coords)protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
pool_master_node_protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSDstatic
pool_npes_protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSDprivate
pool_rank_protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSDprivate
Pool_RMSD(std::string silent_file)protocols::canonical_sampling::mc_convergence_checks::Pool_RMSDinline
Pool_RMSD()protocols::canonical_sampling::mc_convergence_checks::Pool_RMSDinline
pool_size_protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSDprivate
pop_back()protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
rank_protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSDprivate
reformat(core::pose::Pose const &pose, std::string &new_tag)protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSDprivate
set_discovered_out(std::string const &newout)protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
set_excluded_residues(utility::vector1< core::Size > const &excluded_residues)protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
set_nresidues(core::Size nres)protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
set_reserve_size(int max_size)protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
set_transition_threshold(core::Real threshold)protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
size() const protocols::canonical_sampling::mc_convergence_checks::Pool_RMSDinline
slave_gather_new_coords()protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSDprivate
slave_report_no_new_coords()protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSDprivate
tag(core::Size index) const protocols::canonical_sampling::mc_convergence_checks::Pool_RMSDinlineprotected
tracer_visible_protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSDprivate
transfer_buf_protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSDprivate
transition_threshold_protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSDprivate
update_ranks(int const active_nodes[], int new_size)protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
workers_finished()protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
workers_finished_protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSDprivate
~Pool_RMSD()protocols::canonical_sampling::mc_convergence_checks::Pool_RMSDvirtual