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protocols::dna::DesignProteinBackboneAroundDNA Member List

This is the complete list of members for protocols::dna::DesignProteinBackboneAroundDNA, including all inherited members.

apply(Pose &)protocols::dna::DesignProteinBackboneAroundDNAvirtual
protocols::moves::Mover::apply(core::io::serialization::PipeMap &pmap)protocols::moves::Movervirtual
backrub(Pose &, loops::LoopsOP const, TaskFactoryCOP)protocols::dna::DesignProteinBackboneAroundDNAprivate
ccd(Pose &, loops::LoopsOP const, TaskFactoryCOP)protocols::dna::DesignProteinBackboneAroundDNAprivate
clear_info()protocols::moves::Moverinlinevirtual
clone() const protocols::dna::DesignProteinBackboneAroundDNAvirtual
create()protocols::moves::Movervirtual
cycles_inner_protocols::dna::DesignProteinBackboneAroundDNAprivate
cycles_outer_protocols::dna::DesignProteinBackboneAroundDNAprivate
designable_second_shell_protocols::dna::DesignProteinBackboneAroundDNAprivate
DesignProteinBackboneAroundDNA()protocols::dna::DesignProteinBackboneAroundDNA
DesignProteinBackboneAroundDNA(std::string const &, ScoreFunctionCOP)protocols::dna::DesignProteinBackboneAroundDNA
Filters_map typedefprotocols::moves::Mover
fresh_instance() const protocols::dna::DesignProteinBackboneAroundDNAvirtual
gapspan_protocols::dna::DesignProteinBackboneAroundDNAprivate
get_additional_output()protocols::moves::Movervirtual
get_current_job() const protocols::moves::Mover
get_current_tag() const protocols::moves::Moverinline
get_input_pose() const protocols::moves::Mover
get_last_move_status() const protocols::moves::Mover
get_name() const protocols::dna::DesignProteinBackboneAroundDNAvirtual
get_native_pose() const protocols::moves::Mover
get_type() const protocols::moves::Moverinline
ig() const protocols::simple_moves::PackRotamersMover
info()protocols::moves::Moverinlinevirtual
info() const protocols::moves::Moverinlinevirtual
InteractionGraphBaseCOP typedefprotocols::simple_moves::PackRotamersMover
InteractionGraphBaseOP typedefprotocols::simple_moves::PackRotamersMover
last_proposal_density_ratio()protocols::moves::Moverinlinevirtual
Loops typedefprotocols::dna::DesignProteinBackboneAroundDNA
Mover()protocols::moves::Mover
Mover(std::string const &type_name)protocols::moves::Mover
Mover(Mover const &other)protocols::moves::Mover
name()protocols::moves::Moverinlinestatic
nloop(core::Size nloop_in)protocols::simple_moves::PackRotamersMover
nloop() const protocols::simple_moves::PackRotamersMoverinline
note_packertask_settings(Pose const &)protocols::simple_moves::PackRotamersMoverprotectedvirtual
operator=(Mover const &other)protocols::moves::Mover
PackerTaskCOP typedefprotocols::simple_moves::PackRotamersMover
PackRotamersMover()protocols::simple_moves::PackRotamersMover
PackRotamersMover(std::string const &)protocols::simple_moves::PackRotamersMover
PackRotamersMover(ScoreFunctionCOP scorefxn, PackerTaskCOP task=0, core::Size nloop=1)protocols::simple_moves::PackRotamersMover
PackRotamersMover(PackRotamersMover const &other)protocols::simple_moves::PackRotamersMover
parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks, protocols::moves::MoverCacheSP cache)protocols::simple_moves::PackRotamersMovervirtual
parse_my_tag(TagPtr const, moves::DataMap &, protocols::filters::Filters_map const &, moves::Movers_map const &, Pose const &)protocols::dna::DesignProteinBackboneAroundDNAvirtual
parse_score_function(TagPtr const, protocols::moves::DataMap const &, Filters_map const &, protocols::moves::Movers_map const &, Pose const &)protocols::simple_moves::PackRotamersMovervirtual
parse_state(SerializableState const &state)protocols::moves::Movervirtual
parse_task_operations(TagPtr const, protocols::moves::DataMap const &, Filters_map const &, protocols::moves::Movers_map const &, Pose const &)protocols::simple_moves::PackRotamersMovervirtual
Pose typedefprotocols::moves::Mover
PoseCOP typedefprotocols::moves::Mover
register_options()protocols::moves::Moverinlinestatic
reinitialize_for_each_job() const protocols::moves::Movervirtual
reinitialize_for_new_input() const protocols::moves::Movervirtual
repack_rate_protocols::dna::DesignProteinBackboneAroundDNAprivate
reset_status()protocols::moves::Mover
rotamer_sets() const protocols::simple_moves::PackRotamersMover
RotamerSetsCOP typedefprotocols::simple_moves::PackRotamersMover
RotamerSetsOP typedefprotocols::simple_moves::PackRotamersMover
run(Pose &pose, utility::vector0< int > rot_to_pack=utility::vector0< int >()) const protocols::simple_moves::PackRotamersMoverprotectedvirtual
save_state(SerializableState &state)protocols::moves::Movervirtual
score_function(ScoreFunctionCOP sf)protocols::simple_moves::PackRotamersMover
score_function() const protocols::simple_moves::PackRotamersMover
ScoreFunctionCOP typedefprotocols::simple_moves::PackRotamersMover
set_current_job(protocols::jobdist::BasicJobCOP job)protocols::moves::Mover
set_current_tag(std::string const &new_tag)protocols::moves::Moverinline
set_input_pose(PoseCOP pose)protocols::moves::Movervirtual
set_last_move_status(MoverStatus status)protocols::moves::Moverprotected
set_loop_info(Pose const &, Loops const &)protocols::dna::DesignProteinBackboneAroundDNAprivate
set_native_pose(PoseCOP pose)protocols::moves::Movervirtual
setup(Pose &pose)protocols::simple_moves::PackRotamersMoverprotectedvirtual
spread_protocols::dna::DesignProteinBackboneAroundDNAprivate
Strings typedefprotocols::moves::Mover
TagPtr typedefprotocols::moves::Mover
targeted_dna(DnaDesignDefOPs const &)protocols::dna::DesignProteinBackboneAroundDNA
targeted_dna() const protocols::dna::DesignProteinBackboneAroundDNA
targeted_dna_protocols::dna::DesignProteinBackboneAroundDNAprivate
task(PackerTaskCOP t)protocols::simple_moves::PackRotamersMover
task() const protocols::simple_moves::PackRotamersMover
task_factory(TaskFactoryCOP tf)protocols::simple_moves::PackRotamersMover
task_factory() const protocols::simple_moves::PackRotamersMover
task_is_valid(Pose const &pose) const protocols::simple_moves::PackRotamersMover
TaskFactoryCOP typedefprotocols::simple_moves::PackRotamersMover
temp_final_protocols::dna::DesignProteinBackboneAroundDNAprivate
temp_initial_protocols::dna::DesignProteinBackboneAroundDNAprivate
test_move(Pose &pose)protocols::moves::Moverinlinevirtual
type() const protocols::moves::Moverinline
type(const std::string &type_in)protocols::moves::Moverinline
type_protocols::dna::DesignProteinBackboneAroundDNAprivate
~DesignProteinBackboneAroundDNA()protocols::dna::DesignProteinBackboneAroundDNAvirtual
~Mover()protocols::moves::Movervirtual
~PackRotamersMover()protocols::simple_moves::PackRotamersMovervirtual