Rosetta 3.5
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RB_geometry.hh File Reference
#include <core/types.hh>
#include <core/pose/Pose.fwd.hh>
#include <numeric/xyzMatrix.fwd.hh>
#include <utility/vector1.hh>

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::geometry
 

Constant Groups

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::geometry
 

Functions

numeric::xyzMatrix_double protocols::geometry::random_reorientation_matrix (const double phi_range, const double psi_range)
 
void protocols::geometry::centroids_by_jump (core::pose::Pose const &pose, core::Size const jump_id, core::Vector &upstream_ctrd, core::Vector &downstream_ctrd)
 Unweighted centroids of all atoms upstream of the jump vs. all atoms downstream of the jump. More...
 
void protocols::geometry::centroids_by_jump (core::pose::Pose const &pose, core::Size const jump_id, core::Vector &upstream_ctrd, core::Vector &downstream_ctrd, utility::vector1< bool > ok_for_centroid_calculation)
 Unweighted centroids of all atoms upstream of the jump vs. all atoms downstream of the jump. More...
 
std::pair< core::Vector,
core::Vector
protocols::geometry::centroid_pair_by_jump (core::pose::Pose const &pose, core::Size jump_id)
 
core::Vector protocols::geometry::downstream_centroid_by_jump (core::pose::Pose const &pose, core::Size jump_id)
 
core::Vector protocols::geometry::upstream_centroid_by_jump (core::pose::Pose const &pose, core::Size jump_id)
 
void protocols::geometry::centroids_by_jump_int (core::pose::Pose const &pose, core::Size jump_id, core::Vector &upstream_ctrd, core::Vector &downstream_ctrd)
 Unweighted centroids of all atoms upstream of the jump vs. all atoms downstream of the jump for interface residues only. needed to calculate rb_centers for fullatom docking - Sid C. More...
 
numeric::xyzVector< core::Realprotocols::geometry::center_of_mass (pose::Pose const &pose, int const start, int const stop)
 calculates the center of mass of a pose More...
 
int protocols::geometry::residue_center_of_mass (pose::Pose const &pose, int const start, int const stop)
 calculates the center of mass of a pose More...
 
int protocols::geometry::return_nearest_residue (pose::Pose const &pose, int const begin, int const end, Vector center)
 finds the residue nearest some position passed in (normally a center of mass) More...