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protocols::simple_moves::SmoothSymmetricFragmentMover Member List

This is the complete list of members for protocols::simple_moves::SmoothSymmetricFragmentMover, including all inherited members.

apply(core::pose::Pose &)protocols::simple_moves::ClassicFragmentMovervirtual
protocols::simple_moves::FragmentMover::apply(core::pose::Pose &, Size pos) const protocols::simple_moves::FragmentMovervirtual
protocols::moves::Mover::apply(core::io::serialization::PipeMap &pmap)protocols::moves::Movervirtual
apply_at_all_positions(core::pose::Pose &) const protocols::simple_moves::FragmentMovervirtual
apply_fragment(core::fragment::Frame const &frame, Size frag_num, core::kinematics::MoveMap const &movemap, core::pose::Pose &pose) const protocols::simple_moves::SymmetricFragmentMovervirtual
apply_frames(core::pose::Pose &, core::fragment::FrameList const &) const protocols::simple_moves::ClassicFragmentMoverprotectedvirtual
check_ss() const protocols::simple_moves::ClassicFragmentMoverinline
choose_fragment(core::fragment::FrameList const &fl, core::pose::Pose const &p, Size &frame_num, Size &frag_num) const protocols::simple_moves::SmoothSymmetricFragmentMoverinlineprotectedvirtual
choose_window_length(core::pose::Pose const &, Size &window_length) const protocols::simple_moves::ClassicFragmentMoverinlinevirtual
choose_window_start(core::pose::Pose const &, Size window_length, Size &window_start) const protocols::simple_moves::ClassicFragmentMovervirtual
ClassicFragmentMover(core::fragment::FragSetCOP fragset)protocols::simple_moves::ClassicFragmentMover
ClassicFragmentMover(core::fragment::FragSetCOP fragset, core::kinematics::MoveMapCOP movemap)protocols::simple_moves::ClassicFragmentMover
ClassicFragmentMover(core::fragment::ConstantLengthFragSet const &fragset, core::kinematics::MoveMap const &movemap)protocols::simple_moves::ClassicFragmentMover
ClassicFragmentMover(core::fragment::FragSetCOP fragset, core::kinematics::MoveMapCOP movemap, std::string type)protocols::simple_moves::ClassicFragmentMoverprotected
ClassicFragmentMover(core::fragment::FragSetCOP fragset, std::string type)protocols::simple_moves::ClassicFragmentMoverprotected
clear_info()protocols::moves::Moverinlinevirtual
clone() const protocols::moves::Movervirtual
create()protocols::moves::Movervirtual
define_start_window(Size window_start)protocols::simple_moves::ClassicFragmentMover
enable_end_bias_check(bool setting=true)protocols::simple_moves::ClassicFragmentMoverinline
end_bias() const protocols::simple_moves::ClassicFragmentMoverinline
end_bias_check(core::pose::Pose const &, Size window_start) const protocols::simple_moves::ClassicFragmentMovervirtual
end_bias_check_enabled() const protocols::simple_moves::ClassicFragmentMoverinline
Filters_map typedefprotocols::moves::Mover
FragmentMover(core::fragment::FragSetCOP fragset, std::string type)protocols::simple_moves::FragmentMoverprotected
FragmentMover(core::fragment::FragSetCOP fragset, core::kinematics::MoveMapCOP movemap, std::string type)protocols::simple_moves::FragmentMoverprotected
fragments() const protocols::simple_moves::FragmentMover
fragset_protocols::simple_moves::FragmentMoverprotected
fresh_instance() const protocols::moves::Movervirtual
get_additional_output()protocols::moves::Movervirtual
get_current_job() const protocols::moves::Mover
get_current_tag() const protocols::moves::Moverinline
get_input_pose() const protocols::moves::Mover
get_last_move_status() const protocols::moves::Mover
get_name() const protocols::simple_moves::SmoothSymmetricFragmentMoverinlinevirtual
get_native_pose() const protocols::moves::Mover
get_type() const protocols::moves::Moverinline
image_start_protocols::simple_moves::SmoothSymmetricFragmentMoverprivate
info()protocols::moves::Moverinlinevirtual
info() const protocols::moves::Moverinlinevirtual
insert_map() const protocols::simple_moves::FragmentMoverinline
insert_map_protocols::simple_moves::FragmentMoverprotected
insert_size() const protocols::simple_moves::FragmentMoverinline
insert_size_protocols::simple_moves::FragmentMoverprotected
last_proposal_density_ratio()protocols::moves::Moverinlinevirtual
movemap() const protocols::simple_moves::FragmentMover
movemap_protocols::simple_moves::FragmentMoverprotected
Mover()protocols::moves::Mover
Mover(std::string const &type_name)protocols::moves::Mover
Mover(Mover const &other)protocols::moves::Mover
name()protocols::moves::Moverinlinestatic
on_new_fragments()protocols::simple_moves::ClassicFragmentMoverinlinevirtual
operator=(Mover const &other)protocols::moves::Mover
Parent typedefprotocols::simple_moves::SmoothFragmentMover
parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks, MoverCacheSP cache)protocols::moves::Movervirtual
parse_my_tag(TagPtr const tag, DataMap &data, Filters_map const &filters, Movers_map const &movers, Pose const &pose)protocols::moves::Movervirtual
parse_state(SerializableState const &state)protocols::moves::Movervirtual
Pose typedefprotocols::moves::Mover
PoseCOP typedefprotocols::moves::Mover
register_options()protocols::moves::Moverinlinestatic
reinitialize_for_each_job() const protocols::moves::Movervirtual
reinitialize_for_new_input() const protocols::moves::Movervirtual
reset_status()protocols::moves::Mover
save_state(SerializableState &state)protocols::moves::Movervirtual
set_check_ss(bool setting)protocols::simple_moves::ClassicFragmentMoverinline
set_current_job(protocols::jobdist::BasicJobCOP job)protocols::moves::Mover
set_current_tag(std::string const &new_tag)protocols::moves::Moverinline
set_defaults()protocols::simple_moves::ClassicFragmentMovervirtual
set_end_bias(core::Real setting)protocols::simple_moves::ClassicFragmentMoverinline
set_fragments(core::fragment::FragSetCOP new_frags_)protocols::simple_moves::FragmentMovervirtual
set_input_pose(PoseCOP pose)protocols::moves::Movervirtual
set_last_move_status(MoverStatus status)protocols::moves::Moverprotected
set_min_frag_length(Size setting)protocols::simple_moves::ClassicFragmentMoverinline
set_min_overlap(Size setting)protocols::simple_moves::ClassicFragmentMoverinline
set_movemap(core::kinematics::MoveMapCOP movemap)protocols::simple_moves::FragmentMovervirtual
set_native_pose(PoseCOP pose)protocols::moves::Movervirtual
SmoothFragmentMover(core::fragment::FragSetCOP fragset, FragmentCostOP cost)protocols::simple_moves::SmoothFragmentMover
SmoothFragmentMover(core::fragment::FragSetCOP fragset, core::kinematics::MoveMapCOP movemap, FragmentCostOP cost)protocols::simple_moves::SmoothFragmentMover
SmoothFragmentMover(core::fragment::FragSetCOP fragset, core::kinematics::MoveMapCOP movemap, FragmentCostOP cost, std::string move_type)protocols::simple_moves::SmoothFragmentMoverprotected
SmoothSymmetricFragmentMover(core::fragment::FragSetCOP fragset, core::kinematics::MoveMapCOP movemap, FragmentCostOP cost, Size symmetric_residue)protocols::simple_moves::SmoothSymmetricFragmentMoverinline
SmoothSymmetricFragmentMover(core::fragment::FragSetCOP fragset, core::kinematics::MoveMapCOP movemap, FragmentCostOP cost, std::string type, Size symmetric_residue)protocols::simple_moves::SmoothSymmetricFragmentMoverinlineprotected
Strings typedefprotocols::moves::Mover
SymmetricFragmentMover(core::fragment::FragSetCOP fragset, core::kinematics::MoveMapCOP movemap, Size symmetric_residue)protocols::simple_moves::SymmetricFragmentMoverinline
SymmetricFragmentMover(core::fragment::FragSetCOP fragset, core::kinematics::MoveMapCOP movemap, Size symmetric_residue, std::string type)protocols::simple_moves::SymmetricFragmentMoverinlineprotected
TagPtr typedefprotocols::moves::Mover
test_move(Pose &pose)protocols::moves::Moverinlinevirtual
type() const protocols::moves::Moverinline
type(const std::string &type_in)protocols::moves::Moverinline
update_insert_map()protocols::simple_moves::FragmentMoverprotected
use_ss_length_screen() const protocols::simple_moves::SmoothFragmentMoverprotectedvirtual
valid_ss(std::string const &new_ss) const protocols::simple_moves::ClassicFragmentMovervirtual
~ClassicFragmentMover()protocols::simple_moves::ClassicFragmentMover
~FragmentMover()protocols::simple_moves::FragmentMover
~Mover()protocols::moves::Movervirtual
~SmoothFragmentMover()protocols::simple_moves::SmoothFragmentMover