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SequenceAlignment.cc File Reference
#include <core/types.hh>
#include <core/sequence/ScoringScheme.hh>
#include <core/sequence/Sequence.hh>
#include <core/id/SequenceMapping.hh>
#include <core/sequence/SequenceAlignment.hh>
#include <utility/exit.hh>
#include <utility/io/izstream.hh>
#include <ObjexxFCL/string.functions.hh>
#include <iostream>
#include <string>
#include <basic/Tracer.hh>
#include <utility/vector1.hh>

Namespaces

 core
 A class for defining atom parameters, known as atom_types.
 
 core::sequence
 

Constant Groups

 core
 A class for defining atom parameters, known as atom_types.
 
 core::sequence
 

Functions

static basic::Tracer core::sequence::tr ("core.sequence.SequenceAlignment")
 
std::ostream & core::sequence::operator<< (std::ostream &out, const SequenceAlignment &sa)
 
std::istream & core::sequence::operator>> (std::istream &in, SequenceAlignment &aln)
 
bool core::sequence::operator< (SequenceAlignment const &lhs, SequenceAlignment const &rhs)