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protocols::protein_interface_design::FavorNonNativeResidue Class Reference

#include <design_utils.hh>

Collaboration diagram for protocols::protein_interface_design::FavorNonNativeResidue:
Collaboration graph

Public Types

typedef core::pose::Pose Pose
typedef core::Real Real

Public Member Functions

 FavorNonNativeResidue (Pose &pose, Real const native_residue_bonus)
 FavorNonNativeResidue (Pose &pose, utility::vector1< Real > const native_residue_bonus)
virtual ~FavorNonNativeResidue ()

Private Member Functions

void add_residue_constraints (Pose &pose) const

Private Attributes

utility::vector1< Realnon_native_residue_bonus_

Detailed Description

class FavorNonNativeResidue changes a pose object so that its residue identities at the initialization of FavorNonNativeResidue are kept in memory. If the res_type_constraint score term is set to a value other than 0, an energy bonus will be assigned if the residue changes. This is useful if we want to encourage mutation. A negative score would discourage mutation.

Member Typedef Documentation

Constructor & Destructor Documentation

FavorNonNativeResidue::FavorNonNativeResidue ( Pose pose,
core::Real const  non_native_residue_bonus 
FavorNonNativeResidue::FavorNonNativeResidue ( Pose pose,
utility::vector1< Real > const  native_residue_bonus 
virtual protocols::protein_interface_design::FavorNonNativeResidue::~FavorNonNativeResidue ( )

Member Function Documentation

void FavorNonNativeResidue::add_residue_constraints ( pose::Pose pose) const

Member Data Documentation

utility::vector1< Real > protocols::protein_interface_design::FavorNonNativeResidue::non_native_residue_bonus_

The documentation for this class was generated from the following files: