Rosetta 3.5
 All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Friends Macros Pages
Classes | Namespaces | Constant Groups | Enumerations | Functions
IterativeOptEDriver.hh File Reference

A class for optimizing weights in an iterative weight fitting, sequence recovery test protocol. More...

#include <protocols/optimize_weights/IterativeOptEDriver.fwd.hh>
#include <core/types.hh>
#include <core/chemical/AA.hh>
#include <core/optimization/types.hh>
#include <core/pack/task/TaskFactory.fwd.hh>
#include <core/scoring/EnergyMap.hh>
#include <core/scoring/ScoreFunction.fwd.hh>
#include <core/pack/task/PackerTask.fwd.hh>
#include <protocols/optimize_weights/OptEData.fwd.hh>
#include <core/pose/Pose.fwd.hh>
#include <protocols/optimize_weights/OptEMultifunc.fwd.hh>

Classes

class  protocols::optimize_weights::IterativeOptEDriver
 

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::optimize_weights
 

Constant Groups

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::optimize_weights
 

Enumerations

enum  protocols::optimize_weights::AddStatus { protocols::optimize_weights::ADDED_STRUCTURE_AS_INTENDED, protocols::optimize_weights::ADDED_STRUCTURE_OPPOSITE_AS_INTENDED, protocols::optimize_weights::DID_NOT_ADD_STRUCTURE }
 

Functions

void protocols::optimize_weights::load_component_weights (utility::vector1< core::Real > &component_weights)
 Read options[ optE::component_weights ] file from input file. Not a member of the above driver class since its independent of the driver; possibly belongs in a separate source file. Any component specified in the weights file is set to the corresponding weight. Any component not specified in the weights file is set to 1. More...
 

Detailed Description

A class for optimizing weights in an iterative weight fitting, sequence recovery test protocol.

Author
Andrew Leaver-Fay – emulating a protocol by Jim Havranek and Brian Kuhlman.