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core::pack::interaction_graph::DoubleLazyEdge Member List

This is the complete list of members for core::pack::interaction_graph::DoubleLazyEdge, including all inherited members.

aa_indices_from_submatrix_index(int submat_ind) const core::pack::interaction_graph::DoubleLazyEdgeprivate
acknowledge_partial_state_change(int node_ind, int new_state, SparseMatrixIndex const &new_state_sparse_info)core::pack::interaction_graph::DoubleLazyEdge
acknowledge_state_change(int node_ind, int new_state, SparseMatrixIndex const &new_state_sparse_info, core::PackerEnergy &new_energy)core::pack::interaction_graph::DoubleLazyEdge
acknowledge_state_zeroed(int node_ind)core::pack::interaction_graph::DoubleLazyEdge
acknowledge_substitution(int substituted_node_index, core::PackerEnergy const curr_state_energy, int nodes_new_state, SparseMatrixIndex const &nodes_new_state_sparse_info)core::pack::interaction_graph::DoubleLazyEdgeinline
actual_twobody_memory_use() const core::pack::interaction_graph::DoubleLazyEdge
build_sc_only_rotamer()core::pack::interaction_graph::DoubleLazyEdgeinline
count_dynamic_memory() const core::pack::interaction_graph::DoubleLazyEdgevirtual
count_static_memory() const core::pack::interaction_graph::DoubleLazyEdgevirtual
curr_state_energy_core::pack::interaction_graph::DoubleLazyEdgeprivate
declare_energies_final()core::pack::interaction_graph::DoubleLazyEdgevirtual
declare_energies_final_no_deletion()core::pack::interaction_graph::DoubleLazyEdgeinlineprotected
DoubleLazyEdge(InteractionGraphBase *owner, int first_node_ind, int second_node_ind)core::pack::interaction_graph::DoubleLazyEdge
DoubleLazyEdge()core::pack::interaction_graph::DoubleLazyEdgeprivate
DoubleLazyEdge(DoubleLazyEdge const &)core::pack::interaction_graph::DoubleLazyEdgeprivate
drop_aa_submatrix(int submat_ind) const core::pack::interaction_graph::DoubleLazyEdge
edge_index_core::pack::interaction_graph::DoubleLazyEdgeprivate
edge_weight() const core::pack::interaction_graph::EdgeBaseinline
edge_weight(Real)core::pack::interaction_graph::EdgeBaseprotected
EdgeBase(InteractionGraphBase *owner, int first_node_ind, int second_node_ind)core::pack::interaction_graph::EdgeBase
eval_type(int node_index) const core::pack::interaction_graph::OnTheFlyEdgeinline
FixedBBEdge(InteractionGraphBase *owner, int first_node_ind, int second_node_ind)core::pack::interaction_graph::FixedBBEdgeinline
force_aa_neighbors(int node1aa, int node2aa)core::pack::interaction_graph::DoubleLazyEdgevirtual
force_all_aa_neighbors()core::pack::interaction_graph::DoubleLazyEdgevirtual
get_aa_submatrix_energies(int node1aa, int node2aa) const core::pack::interaction_graph::DoubleLazyEdge
get_current_two_body_energy() const core::pack::interaction_graph::DoubleLazyEdge
get_dlazy_ig_owner() const core::pack::interaction_graph::DoubleLazyEdgeinlineprivate
get_dlazy_ig_owner()core::pack::interaction_graph::DoubleLazyEdgeinlineprivate
get_dlazy_node(int index) const core::pack::interaction_graph::DoubleLazyEdgeinlineprivate
get_dlazy_node(int index)core::pack::interaction_graph::DoubleLazyEdgeinlineprivate
get_edges_position_in_nodes_edge_vector(int index) const core::pack::interaction_graph::EdgeBaseinlineprotected
get_energy_following_partial_state_assignment()core::pack::interaction_graph::DoubleLazyEdge
get_energy_for_state_pair(int nodes_states[2], SparseMatrixIndex sparse_matrix_indices[2])core::pack::interaction_graph::DoubleLazyEdgeprivate
get_first_node_ind() const core::pack::interaction_graph::EdgeBase
get_node(int index) const core::pack::interaction_graph::EdgeBaseinlineprotected
get_node(int index)core::pack::interaction_graph::EdgeBaseinlineprotected
get_node_index(int index) const core::pack::interaction_graph::EdgeBaseinlineprotected
get_num_states_for_node(int index) const core::pack::interaction_graph::EdgeBaseinlineprotected
get_otf_node(int which_node) const core::pack::interaction_graph::OnTheFlyEdgeinlineprotected
get_otf_node(int which_node)core::pack::interaction_graph::OnTheFlyEdgeinlineprotected
get_other_ind(int callers_index) const core::pack::interaction_graph::EdgeBase
get_other_node(int callers_index) const core::pack::interaction_graph::EdgeBase
get_owner() const core::pack::interaction_graph::EdgeBaseinline
get_owner()core::pack::interaction_graph::EdgeBaseinline
get_proline_correction(int which_node, int state) const core::pack::interaction_graph::OnTheFlyEdgeinlineprotected
get_proline_correction_for_node(int node_ind, int state) const core::pack::interaction_graph::OnTheFlyEdgeinline
get_second_node_ind() const core::pack::interaction_graph::EdgeBase
get_sparse_aa_info(int node1aa, int node2aa) const core::pack::interaction_graph::DoubleLazyEdgevirtual
get_two_body_energy(int const node1state, int const node2state) const core::pack::interaction_graph::DoubleLazyEdgevirtual
get_two_body_energy_smi(int const node1state, int const node2state, SparseMatrixIndex const &node1info, SparseMatrixIndex const &node2info) const core::pack::interaction_graph::DoubleLazyEdge
get_two_body_table_size() const core::pack::interaction_graph::DoubleLazyEdge
long_range_interactions_exist() const core::pack::interaction_graph::OnTheFlyEdgeinline
NOT_YET_COMPUTED_ENERGYcore::pack::interaction_graph::DoubleLazyEdgestatic
note_long_range_interactions_exist()core::pack::interaction_graph::OnTheFlyEdgeinline
note_short_range_interactions_exist()core::pack::interaction_graph::OnTheFlyEdgeinline
OnTheFlyEdge(InteractionGraphBase *owner, int first_node_ind, int second_node_ind)core::pack::interaction_graph::OnTheFlyEdge
operator=(DoubleLazyEdge const &)core::pack::interaction_graph::DoubleLazyEdgeprivate
partial_state_assignment_core::pack::interaction_graph::DoubleLazyEdgeprivate
pd_edge_table_all_zeros() const core::pack::interaction_graph::DoubleLazyEdgeinlineprotected
potential_twobody_memory_use() const core::pack::interaction_graph::DoubleLazyEdge
prep_aa_submatrix(int node1aa, int node2aa) const core::pack::interaction_graph::DoubleLazyEdgeprivate
prepare_for_simulated_annealing()core::pack::interaction_graph::DoubleLazyEdgevirtual
prepare_for_simulated_annealing_no_deletion()core::pack::interaction_graph::DoubleLazyEdgeinlineprotected
print_current_energy() const core::pack::interaction_graph::DoubleLazyEdge
ran_annealing_since_pair_energy_table_cleared_core::pack::interaction_graph::DoubleLazyEdgeprivate
read_aa_submatrix(SparseMatrixIndex node1info, SparseMatrixIndex node2info) const core::pack::interaction_graph::DoubleLazyEdgeprivate
same_edge(int node1, int node2) const core::pack::interaction_graph::EdgeBase
set_aa_submatrix(SparseMatrixIndex node1info, SparseMatrixIndex node2info, core::PackerEnergy setting) const core::pack::interaction_graph::DoubleLazyEdgeprivate
set_edge_index(int index)core::pack::interaction_graph::DoubleLazyEdge
set_edge_weight(Real weight)core::pack::interaction_graph::DoubleLazyEdgevirtual
set_pos_in_node_edgevector(int callers_index, int position)core::pack::interaction_graph::EdgeBase
set_pos_in_owners_list(std::list< EdgeBase * >::iterator edge_iterator)core::pack::interaction_graph::EdgeBase
set_ProCorrection_values(int node_not_necessarily_proline, int state, core::PackerEnergy bb_nonprobb_E, core::PackerEnergy bb_probb_E, core::PackerEnergy sc_nonprobb_E, core::PackerEnergy sc_probb_E)core::pack::interaction_graph::OnTheFlyEdge
set_sparse_aa_info(FArray2_bool const &)core::pack::interaction_graph::DoubleLazyEdgevirtual
core::pack::interaction_graph::OnTheFlyEdge::set_sparse_aa_info(ObjexxFCL::FArray2_bool const &sparse_conn_info)=0core::pack::interaction_graph::FixedBBEdgepure virtual
short_range_interactions_exist() const core::pack::interaction_graph::OnTheFlyEdgeinline
sparse_aa_neighbors_core::pack::interaction_graph::DoubleLazyEdgeprivate
submatrix_index(int nod1aa, int node2aa) const core::pack::interaction_graph::DoubleLazyEdgeprivate
submatrix_size(int node1aa, int node2aa) const core::pack::interaction_graph::DoubleLazyEdgeprivate
two_body_energies_core::pack::interaction_graph::DoubleLazyEdgemutableprivate
which_node(int node_index) const core::pack::interaction_graph::EdgeBaseinlineprotected
wipe_two_body_energies_for_node_state(int node, int state)core::pack::interaction_graph::DoubleLazyEdgeprivate
~DoubleLazyEdge()core::pack::interaction_graph::DoubleLazyEdgevirtual
~EdgeBase()core::pack::interaction_graph::EdgeBasevirtual
~FixedBBEdge()core::pack::interaction_graph::FixedBBEdgeinlinevirtual
~OnTheFlyEdge()core::pack::interaction_graph::OnTheFlyEdgevirtual