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protocols::canonical_sampling::PDBTrajectoryRecorder Member List

This is the complete list of members for protocols::canonical_sampling::PDBTrajectoryRecorder, including all inherited members.

apply(core::pose::Pose &pose)protocols::canonical_sampling::TrajectoryRecordervirtual
protocols::moves::Mover::apply(core::io::serialization::PipeMap &pmap)protocols::moves::Movervirtual
clear_info()protocols::moves::Moverinlinevirtual
clone() const protocols::canonical_sampling::PDBTrajectoryRecordervirtual
create()protocols::moves::Movervirtual
cumulate_jobs() const protocols::canonical_sampling::TrajectoryRecorderinline
cumulate_replicas() const protocols::canonical_sampling::TrajectoryRecorderinline
file_name() const protocols::canonical_sampling::TrajectoryRecorderinline
file_name(std::string const &file_name)protocols::canonical_sampling::TrajectoryRecorderinline
Filters_map typedefprotocols::moves::Mover
finalize_simulation(core::pose::Pose &pose, protocols::canonical_sampling::MetropolisHastingsMover const &metropolis_hastings_mover)protocols::canonical_sampling::PDBTrajectoryRecordervirtual
fresh_instance() const protocols::canonical_sampling::PDBTrajectoryRecordervirtual
get_additional_output()protocols::moves::Movervirtual
get_current_job() const protocols::moves::Mover
get_current_tag() const protocols::moves::Moverinline
get_input_pose() const protocols::moves::Mover
get_last_move_status() const protocols::moves::Mover
get_name() const protocols::canonical_sampling::PDBTrajectoryRecordervirtual
get_native_pose() const protocols::moves::Mover
get_type() const protocols::moves::Moverinline
info()protocols::moves::Moverinlinevirtual
info() const protocols::moves::Moverinlinevirtual
initialize_simulation(core::pose::Pose &pose, protocols::canonical_sampling::MetropolisHastingsMover const &metropolis_hastings_mover, core::Size cycle)protocols::canonical_sampling::TrajectoryRecordervirtual
last_proposal_density_ratio()protocols::moves::Moverinlinevirtual
model_count() const protocols::canonical_sampling::TrajectoryRecorderinline
Mover()protocols::moves::Mover
Mover(std::string const &type_name)protocols::moves::Mover
Mover(Mover const &other)protocols::moves::Mover
name()protocols::moves::Moverinlinestatic
observe_after_metropolis(protocols::canonical_sampling::MetropolisHastingsMover const &metropolis_hastings_mover)protocols::canonical_sampling::TrajectoryRecordervirtual
operator=(PDBTrajectoryRecorder const &)protocols::canonical_sampling::PDBTrajectoryRecorderprivate
protocols::canonical_sampling::ThermodynamicObserver::operator=(Mover const &other)protocols::moves::Mover
Parent typedefprotocols::canonical_sampling::PDBTrajectoryRecorderprivate
parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks, MoverCacheSP cache)protocols::moves::Movervirtual
parse_my_tag(utility::tag::TagPtr const tag, protocols::moves::DataMap &data, protocols::filters::Filters_map const &filters, protocols::moves::Movers_map const &movers, core::pose::Pose const &pose)protocols::canonical_sampling::PDBTrajectoryRecordervirtual
parse_state(SerializableState const &state)protocols::moves::Movervirtual
PDBTrajectoryRecorder()protocols::canonical_sampling::PDBTrajectoryRecorder
PDBTrajectoryRecorder(PDBTrajectoryRecorder const &)protocols::canonical_sampling::PDBTrajectoryRecorder
Pose typedefprotocols::moves::Mover
PoseCOP typedefprotocols::moves::Mover
register_options()protocols::canonical_sampling::TrajectoryRecorderstatic
reinitialize_for_each_job() const protocols::moves::Movervirtual
reinitialize_for_new_input() const protocols::moves::Movervirtual
requires_pose()protocols::canonical_sampling::ThermodynamicObserverinlinevirtual
reset(protocols::moves::MonteCarlo const &mc, protocols::canonical_sampling::MetropolisHastingsMoverCAP metropolis_hastings_mover=0)protocols::canonical_sampling::PDBTrajectoryRecordervirtual
reset_status()protocols::moves::Mover
restart_simulation(core::pose::Pose &, protocols::canonical_sampling::MetropolisHastingsMover &, core::Size &, core::Size &, core::Real &)protocols::canonical_sampling::ThermodynamicObserverinlinevirtual
save_state(SerializableState &state)protocols::moves::Movervirtual
set_current_job(protocols::jobdist::BasicJobCOP job)protocols::moves::Mover
set_current_tag(std::string const &new_tag)protocols::moves::Moverinline
set_input_pose(PoseCOP pose)protocols::moves::Movervirtual
set_last_move_status(MoverStatus status)protocols::moves::Moverprotected
set_native_pose(PoseCOP pose)protocols::moves::Movervirtual
step_count() const protocols::canonical_sampling::TrajectoryRecorderinline
stride() const protocols::canonical_sampling::TrajectoryRecorderinline
stride(core::Size stride)protocols::canonical_sampling::TrajectoryRecorderinline
Strings typedefprotocols::moves::Mover
TagPtr typedefprotocols::moves::Mover
test_move(Pose &pose)protocols::moves::Moverinlinevirtual
ThermodynamicObserver()protocols::canonical_sampling::ThermodynamicObserver
trajectory_stream_protocols::canonical_sampling::PDBTrajectoryRecorderprivate
TrajectoryRecorder()protocols::canonical_sampling::TrajectoryRecorder
TrajectoryRecorder(TrajectoryRecorder const &)protocols::canonical_sampling::TrajectoryRecorder
type() const protocols::moves::Moverinline
type(const std::string &type_in)protocols::moves::Moverinline
update_after_boltzmann(core::pose::Pose const &pose, protocols::canonical_sampling::MetropolisHastingsMoverCAP metropolis_hastings_mover=0)protocols::canonical_sampling::TrajectoryRecorder
update_after_boltzmann(protocols::moves::MonteCarlo const &mc)protocols::canonical_sampling::TrajectoryRecorder
write_model(core::pose::Pose const &pose, protocols::canonical_sampling::MetropolisHastingsMoverCAP metropolis_hastings_mover=0)protocols::canonical_sampling::PDBTrajectoryRecorderprivatevirtual
~Mover()protocols::moves::Movervirtual
~PDBTrajectoryRecorder()protocols::canonical_sampling::PDBTrajectoryRecorder
~ThermodynamicObserver()protocols::canonical_sampling::ThermodynamicObservervirtual
~TrajectoryRecorder()protocols::canonical_sampling::TrajectoryRecorder