add(std::pair< FragmentCandidateOP, scores::FragmentScoreMapOP >) | protocols::frag_picker::quota::QuotaCollector | |
protocols::frag_picker::CandidatesCollector::add(ScoredCandidate)=0 | protocols::frag_picker::CandidatesCollector | pure virtual |
add_pool(Size position, QuotaPoolOP the_pool) | protocols::frag_picker::quota::QuotaCollector | inline |
attach_secondary_structure_pools(Real, core::fragment::SecondaryStructureOP, std::string, Size, utility::vector1< Size >, utility::vector1< Real >, Size) | protocols::frag_picker::quota::QuotaCollector | |
clear() | protocols::frag_picker::quota::QuotaCollector | virtual |
count_candidates(Size) const | protocols::frag_picker::quota::QuotaCollector | virtual |
count_candidates() const | protocols::frag_picker::quota::QuotaCollector | virtual |
count_pools(Size position) const | protocols::frag_picker::quota::QuotaCollector | inline |
frag_size_ | protocols::frag_picker::quota::QuotaCollector | private |
frags_for_pos_ | protocols::frag_picker::quota::QuotaCollector | private |
get_candidates(Size position_in_query) | protocols::frag_picker::quota::QuotaCollector | virtual |
get_pool(Size position, Size pool_id) const | protocols::frag_picker::quota::QuotaCollector | inline |
get_pool(Size position, Size pool_id) | protocols::frag_picker::quota::QuotaCollector | inline |
insert(Size pos, CandidatesCollectorOP collector) | protocols::frag_picker::quota::QuotaCollector | inlinevirtual |
list_pools(std::ostream &where) const | protocols::frag_picker::quota::QuotaCollector | |
print_report(std::ostream &output, scores::FragmentScoreManagerOP scoring) const | protocols::frag_picker::quota::QuotaCollector | virtual |
query_length() const | protocols::frag_picker::quota::QuotaCollector | inlinevirtual |
QuotaCollector(Size query_size, Size frag_size) | protocols::frag_picker::quota::QuotaCollector | inline |
renormalize_quota_pools() | protocols::frag_picker::quota::QuotaCollector | |
storage_ | protocols::frag_picker::quota::QuotaCollector | private |