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Public Member Functions | Private Attributes | List of all members
protocols::jumping::JumpsFromAllPairings Class Reference

#include <JumpSetup.hh>

Inheritance diagram for protocols::jumping::JumpsFromAllPairings:
Inheritance graph
Collaboration diagram for protocols::jumping::JumpsFromAllPairings:
Collaboration graph

Public Member Functions

 JumpsFromAllPairings (const core::Size total_residue, core::scoring::dssp::PairingsList const &jumps, ObjexxFCL::FArray1D_float const &cut_probability)
JumpSample create_jump_sample () const
- Public Member Functions inherited from protocols::jumping::BaseJumpSetup
virtual ~BaseJumpSetup ()
 Automatically generated virtual destructor for class deriving directly from ReferenceCount. More...
virtual core::fragment::FragSetOP generate_jump_frags (JumpSample const &, core::kinematics::MoveMap const &mm) const
 returns an ordered FragSet that is compatible with the JumpSample default: generate jumps from ss-library according to JumpSample More...
virtual JumpSample clean_jumps (JumpSample const &) const =0
 take from a given JumpSample only those Jumps, which could also have been created by create_jump_sample() More...
virtual std::string type_name () const =0

Private Attributes

core::Size total_residue_
core::scoring::dssp::PairingsList jumps_
ObjexxFCL::FArray1D_float cut_prob_

Constructor & Destructor Documentation

protocols::jumping::JumpsFromAllPairings::JumpsFromAllPairings ( const core::Size  total_residue,
core::scoring::dssp::PairingsList const &  jumps,
ObjexxFCL::FArray1D_float const &  cut_probability 

Member Function Documentation

JumpSample protocols::jumping::JumpsFromAllPairings::create_jump_sample ( ) const

Member Data Documentation

ObjexxFCL::FArray1D_float protocols::jumping::JumpsFromAllPairings::cut_prob_

Referenced by create_jump_sample().

core::scoring::dssp::PairingsList protocols::jumping::JumpsFromAllPairings::jumps_

Referenced by create_jump_sample().

core::Size protocols::jumping::JumpsFromAllPairings::total_residue_

Referenced by create_jump_sample().

The documentation for this class was generated from the following file: