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protocols::toolbox::match_enzdes_util::EnzConstraintIO Member List

This is the complete list of members for protocols::toolbox::match_enzdes_util::EnzConstraintIO, including all inherited members.

add_constraints_to_pose(core::pose::Pose &pose, core::scoring::ScoreFunctionCOP scofx, bool accept_blocks_missing_header)protocols::toolbox::match_enzdes_util::EnzConstraintIO
add_constraints_to_pose_for_block_without_clearing_and_header_processing(core::pose::Pose &pose, core::scoring::ScoreFunctionCOP scofx, core::Size cst_block) const protocols::toolbox::match_enzdes_util::EnzConstraintIO
add_pregenerated_constraints_to_pose(core::pose::Pose &pose, core::scoring::ScoreFunctionCOP scofx) const protocols::toolbox::match_enzdes_util::EnzConstraintIO
allowed_res_name3_at_position(core::pose::Pose const &pose, core::Size const seqpos) const protocols::toolbox::match_enzdes_util::EnzConstraintIO
clear_active_pose_constraints_for_block(core::pose::Pose &pose, core::Size cst_block) const protocols::toolbox::match_enzdes_util::EnzConstraintIO
contains_position(core::pose::Pose const &pose, core::Size const seqpos) const protocols::toolbox::match_enzdes_util::EnzConstraintIO
cst_pairs_protocols::toolbox::match_enzdes_util::EnzConstraintIOprotected
determine_target_downstream_res()protocols::toolbox::match_enzdes_util::EnzConstraintIOprivate
enz_cst_params(core::Size block) const protocols::toolbox::match_enzdes_util::EnzConstraintIO
enz_cst_params_missing_in_pose(core::pose::Pose const &pose) const protocols::toolbox::match_enzdes_util::EnzConstraintIO
enz_cst_params_size()protocols::toolbox::match_enzdes_util::EnzConstraintIOinline
EnzConstraintIO(core::chemical::ResidueTypeSetCAP src_restype_set)protocols::toolbox::match_enzdes_util::EnzConstraintIO
generate_pose_specific_data(core::pose::Pose &pose, core::scoring::ScoreFunctionCOP scofx) const protocols::toolbox::match_enzdes_util::EnzConstraintIOprivate
generate_pose_specific_data_for_block(core::pose::Pose &pose, core::scoring::ScoreFunctionCOP scofx, core::Size cst_block) const protocols::toolbox::match_enzdes_util::EnzConstraintIOprivate
generic_instance_protocols::toolbox::match_enzdes_util::EnzConstraintIOprivatestatic
get_instance()protocols::toolbox::match_enzdes_util::EnzConstraintIOstatic
is_backbone_only_cst(core::pose::Pose const &pose, core::Size const seqpos) const protocols::toolbox::match_enzdes_util::EnzConstraintIO
mcfi_list(core::Size block) const protocols::toolbox::match_enzdes_util::EnzConstraintIO
mcfi_lists_protocols::toolbox::match_enzdes_util::EnzConstraintIOprivate
mcfi_lists_size() const protocols::toolbox::match_enzdes_util::EnzConstraintIO
num_mcfi_lists() const protocols::toolbox::match_enzdes_util::EnzConstraintIOinline
ordered_constrained_positions(core::pose::Pose const &pose) const protocols::toolbox::match_enzdes_util::EnzConstraintIO
process_pdb_header(core::pose::Pose &pose, bool accept_missing_blocks)protocols::toolbox::match_enzdes_util::EnzConstraintIO
read_enzyme_cstfile(std::string fname)protocols::toolbox::match_enzdes_util::EnzConstraintIO
remap_resid(core::id::SequenceMapping const &smap)protocols::toolbox::match_enzdes_util::EnzConstraintIO
remove_constraints_from_pose(core::pose::Pose &pose, bool const keep_covalent, bool const fail_on_constraints_missing) const protocols::toolbox::match_enzdes_util::EnzConstraintIO
remove_constraints_from_pose_for_block(core::pose::Pose &pose, core::Size cst_block, bool const fail_on_constraints_missing) const protocols::toolbox::match_enzdes_util::EnzConstraintIO
remove_position_from_template_res(core::pose::Pose &pose, core::Size pos) const protocols::toolbox::match_enzdes_util::EnzConstraintIO
remove_position_from_template_res_for_block(core::pose::Pose &pose, core::Size pos, core::Size cst_block) const protocols::toolbox::match_enzdes_util::EnzConstraintIO
restype_set_protocols::toolbox::match_enzdes_util::EnzConstraintIOprivate
set_external_position_for_resA_in_parameter_block(core::Size cst_block, core::Size respos)protocols::toolbox::match_enzdes_util::EnzConstraintIO
set_external_position_for_resB_in_parameter_block(core::Size cst_block, core::Size respos)protocols::toolbox::match_enzdes_util::EnzConstraintIO
set_position_for_missing_res_in_parameter_block(core::pose::Pose &pose, core::Size cst_block, core::Size respos) const protocols::toolbox::match_enzdes_util::EnzConstraintIO
show_cst_definitions() const protocols::toolbox::match_enzdes_util::EnzConstraintIO
target_downstream_res() const protocols::toolbox::match_enzdes_util::EnzConstraintIOinline
target_downstream_res_protocols::toolbox::match_enzdes_util::EnzConstraintIOprivate
update_pdb_remarks_for_backbone_params(core::pose::Pose &pose) const protocols::toolbox::match_enzdes_util::EnzConstraintIO
~EnzConstraintIO()protocols::toolbox::match_enzdes_util::EnzConstraintIOvirtual