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core::kinematics::Jump Member List

This is the complete list of members for core::kinematics::Jump, including all inherited members.

distance(Jump const &a_in, Jump const &b_in)core::kinematics::Jumpfriend
fold_in_rb_deltas()core::kinematics::Jump
from_bond_cst(utility::vector1< Vector > &atoms, utility::vector1< Real > const &csts)core::kinematics::Jump
from_stubs(Stub const &stub1, Stub const &stub2)core::kinematics::Jump
gaussian_move(int const dir, float const trans_mag, float const rot_mag)core::kinematics::Jump
gaussian_move_single_rb(int const dir, float const mag, int rb)core::kinematics::Jump
get_rb_center(int const dir) const core::kinematics::Jumpinline
get_rb_delta(int const dir) const core::kinematics::Jumpinline
get_rb_delta(int const rb_no, int const dir) const core::kinematics::Jumpinline
get_rotation() const core::kinematics::Jumpinline
get_translation() const core::kinematics::Jumpinline
identity_transform()core::kinematics::Jump
Jump()core::kinematics::Jumpinline
Jump(const RT &src_rt)core::kinematics::Jumpinline
Jump(Stub const &stub1, Stub const &stub2)core::kinematics::Jumpinline
Jump(const Jump &src)core::kinematics::Jumpinline
make_jump(Stub const &stub1, Stub &stub2) const core::kinematics::Jump
Matrix typedefcore::kinematics::Jump
nonzero_deltas() const core::kinematics::Jump
operator<<(std::ostream &os, const Jump &jump)core::kinematics::Jumpfriend
operator=(Jump const &src)core::kinematics::Jumpinline
operator>>(std::istream &is, Jump &jump)core::kinematics::Jumpfriend
ortho_check() const core::kinematics::Jump
random_trans(const float dist_in)core::kinematics::Jump
rb_centercore::kinematics::Jumpprivate
rb_deltacore::kinematics::Jumpprivate
rb_index(int const dir) const core::kinematics::Jumpinlineprivate
reset()core::kinematics::Jump
reverse()core::kinematics::Jump
reversed() const core::kinematics::Jump
ROT_Xcore::kinematics::Jumpstatic
ROT_Ycore::kinematics::Jumpstatic
ROT_Zcore::kinematics::Jumpstatic
rotation_by_axis(Stub const &stub, Vector const &axis, Vector const &center, float const alpha)core::kinematics::Jump
rotation_by_matrix(Stub const &stub, Vector const &center, Matrix const &matrix)core::kinematics::Jump
rt() const core::kinematics::Jump
rt_core::kinematics::Jumpprivate
set_rb_center(const int dir, Stub const &stub, Vector const &center)core::kinematics::Jump
set_rb_delta(int const rb_no, int const dir, Real const value)core::kinematics::Jump
set_rb_deltas(int const dir, utility::vector1< Real > const &)core::kinematics::Jump
set_rotation(Matrix const &R_in)core::kinematics::Jump
set_translation(Vector const &t)core::kinematics::Jump
TRANS_Xcore::kinematics::Jumpstatic
TRANS_Ycore::kinematics::Jumpstatic
TRANS_Zcore::kinematics::Jumpstatic
translation_along_axis(Stub const &stub, Vector const &axis, float const dist)core::kinematics::Jump
Vector typedefcore::kinematics::Jump