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H3RefineCCD.cc File Reference

Build a homology model of an antibody2. More...

#include <protocols/antibody2/H3RefineCCD.hh>
#include <basic/Tracer.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <protocols/simple_moves/PackRotamersMover.hh>
#include <protocols/simple_moves/BackboneMover.hh>
#include <protocols/simple_moves/MinMover.hh>
#include <protocols/simple_moves/RotamerTrialsMover.hh>
#include <protocols/simple_moves/RotamerTrialsMinMover.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/constraints/ConstraintFactory.hh>
#include <core/scoring/constraints/ConstraintIO.hh>
#include <core/pack/task/PackerTask.hh>
#include <core/pack/task/TaskFactory.hh>
#include <core/pack/task/operation/NoRepackDisulfides.hh>
#include <core/pack/task/operation/OperateOnCertainResidues.hh>
#include <core/pack/task/operation/ResFilters.hh>
#include <core/pack/task/operation/ResLvlTaskOperations.hh>
#include <core/pack/task/operation/TaskOperations.hh>
#include <protocols/toolbox/task_operations/RestrictToInterface.hh>
#include <protocols/loops/loop_closure/ccd/CcdLoopClosureMover.hh>
#include <protocols/loops/loops_main.hh>
#include <protocols/loops/Loop.hh>
#include <protocols/loops/Loops.hh>
#include <protocols/loops/loop_mover/LoopMover.hh>
#include <protocols/comparative_modeling/LoopRelaxMover.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/kinematics/MoveMap.hh>
#include <protocols/moves/ChangeFoldTreeMover.hh>
#include <protocols/moves/RepeatMover.hh>
#include <protocols/moves/MonteCarlo.hh>
#include <protocols/moves/MoverContainer.hh>
#include <core/import_pose/import_pose.hh>
#include <core/io/pdb/pose_io.hh>
#include <core/pose/Pose.hh>
#include <core/pose/PDBInfo.hh>
#include <core/pose/util.hh>
#include <protocols/antibody2/AntibodyUtil.hh>
#include <core/chemical/VariantType.hh>

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::antibody2
 

Constant Groups

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::antibody2
 

Functions

static basic::Tracer TR ("protocols.antibody2.H3RefineCCD")
 

Detailed Description

Build a homology model of an antibody2.

Detailed:
Author
Jianqing Xu (xubes.nosp@m.t@gm.nosp@m.ail.c.nosp@m.om)

Function Documentation

static basic::Tracer TR ( "protocols.antibody2.H3RefineCCD"  )
static