core::scoring::dna::DNA_BasePotential Member List

This is the complete list of members for core::scoring::dna::DNA_BasePotential, including all inherited members.

base_pair_score(Residue const &rsd1, Residue const &rsd2) const	core::scoring::dna::DNA_BasePotential
base_score(InteractionType const &type, std::string const &bases, utility::vector1< Real > const &params) const	core::scoring::dna::DNA_BasePotential	private
base_step_score(Residue const &rsd1, Residue const &rsd2) const	core::scoring::dna::DNA_BasePotential
base_string(Residue const &rsd) const	core::scoring::dna::DNA_BasePotential	inlineprivate
BP_type enum value	core::scoring::dna::DNA_BasePotential	private
BS_type enum value	core::scoring::dna::DNA_BasePotential	private
DNA_BasePotential()	core::scoring::dna::DNA_BasePotential
eval_base_pair_derivative(Residue const &rsd1, Residue const &rsd2, Vector &F1, Vector &F2, Real const sign_factor) const	core::scoring::dna::DNA_BasePotential
eval_base_pair_Z_scores(Residue const &rsd1, Residue const &rsd2, utility::vector1< Real > &z_scores) const	core::scoring::dna::DNA_BasePotential
eval_base_step_derivative(Residue const &rsd1, Residue const &rsd2, Vector &F1, Vector &F2, Real const external_sign_factor) const	core::scoring::dna::DNA_BasePotential
eval_base_step_Z_scores(Residue const &rsd1, Residue const &rsd2, utility::vector1< Real > &z_scores) const	core::scoring::dna::DNA_BasePotential
FArray3D_Real typedef	core::scoring::dna::DNA_BasePotential
FArray4D_Real typedef	core::scoring::dna::DNA_BasePotential
get_array_indices(InteractionType const &t, std::string const &bases, int &i1, int &i2) const	core::scoring::dna::DNA_BasePotential	private
InteractionType enum name	core::scoring::dna::DNA_BasePotential	private
load_score_tables()	core::scoring::dna::DNA_BasePotential	private
Matrix typedef	core::scoring::dna::DNA_BasePotential
mean(InteractionType const &t, std::string const &bases, int const p) const	core::scoring::dna::DNA_BasePotential	inlineprivate
mean_	core::scoring::dna::DNA_BasePotential	private
Params typedef	core::scoring::dna::DNA_BasePotential
Residue typedef	core::scoring::dna::DNA_BasePotential
set_mean_and_stddev(InteractionType const &type, std::string const &bases, int const index, Real mean, Real stddev)	core::scoring::dna::DNA_BasePotential	private
set_stiffness(InteractionType const &type, std::string const &bases, int const index1, int const index2, Real const val)	core::scoring::dna::DNA_BasePotential	private
stddev(InteractionType const &t, std::string const &bases, int const p) const	core::scoring::dna::DNA_BasePotential	inlineprivate
stddev_	core::scoring::dna::DNA_BasePotential	private
stiffness(InteractionType const &t, std::string const &bases, int const p1, int const p2) const	core::scoring::dna::DNA_BasePotential	inlineprivate
stiffness_	core::scoring::dna::DNA_BasePotential	private
~DNA_BasePotential()	core::scoring::dna::DNA_BasePotential	virtual