protocols::fldsgn::filters::FragQualFilter Class Reference

#include <FragQualFilter.hh>

Inheritance diagram for protocols::fldsgn::filters::FragQualFilter:

Collaboration diagram for protocols::fldsgn::filters::FragQualFilter:

Public Types
typedef protocols::filters::Filter	Super
typedef protocols::filters::Filter	Filter
typedef protocols::filters::FilterOP	FilterOP
typedef core::Real	Real
typedef core::pose::Pose	Pose
typedef std::string	String
typedef utility::tag::TagPtr	TagPtr
typedef protocols::filters::Filters_map	Filters_map
typedef protocols::moves::DataMap	DataMap
typedef protocols::moves::Movers_map	Movers_map

Public Member Functions
	FragQualFilter ()
	FragQualFilter (FragQualFilter const &rval)
virtual	~FragQualFilter ()
virtual FilterOP	clone () const
virtual FilterOP	fresh_instance () const
void	filtered_value (Real const &ss)
void	filtered_type (String const &ss)
virtual std::string	name () const
virtual void	parse_my_tag (TagPtr const tag, DataMap &data, Filters_map const &filters, Movers_map const &movers, Pose const &pose)
	parse xml More...
virtual bool	apply (Pose const &pose) const
	Returns true if the given pose passes the filter, false otherwise. More...
virtual Real	report_sm (Pose const &pose) const
	used to report filter internals through a score or silent file More...
virtual void	report (std::ostream &out, Pose const &pose) const
	used to report score More...
Real	compute (Pose const &pose) const
Public Member Functions inherited from protocols::filters::Filter
	Filter ()
	Filter (std::string const &)
	Filter (Filter const &)
virtual	~Filter ()
virtual std::string	get_type () const
std::string	get_user_defined_name () const
void	set_user_defined_name (std::string const &name)
virtual void	clear ()
	used to clear internal variables if needed. Using fresh_instance is preferred since it's a pure virtual More...
virtual void	apply (core::io::serialization::PipeMap &pmap)
virtual void	score (core::io::serialization::PipeMap &pmap)
virtual core::Real	score (core::pose::Pose &pose)
virtual void	parse_def (utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks)

Private Attributes
String	filtered_type_
Real	filtered_value_
Real	rmsd_cutoff_

Additional Inherited Members
Protected Attributes inherited from protocols::filters::Filter
std::string	scorename_

Member Typedef Documentation

typedef protocols::moves::DataMap protocols::fldsgn::filters::FragQualFilter::DataMap

typedef protocols::filters::Filter protocols::fldsgn::filters::FragQualFilter::Filter

typedef protocols::filters::FilterOP protocols::fldsgn::filters::FragQualFilter::FilterOP

typedef protocols::filters::Filters_map protocols::fldsgn::filters::FragQualFilter::Filters_map

typedef protocols::moves::Movers_map protocols::fldsgn::filters::FragQualFilter::Movers_map

typedef core::pose::Pose protocols::fldsgn::filters::FragQualFilter::Pose

typedef core::Real protocols::fldsgn::filters::FragQualFilter::Real

typedef std::string protocols::fldsgn::filters::FragQualFilter::String

typedef protocols::filters::Filter protocols::fldsgn::filters::FragQualFilter::Super

typedef utility::tag::TagPtr protocols::fldsgn::filters::FragQualFilter::TagPtr

Constructor & Destructor Documentation

protocols::fldsgn::filters::FragQualFilter::FragQualFilter

(

)

Referenced by clone(), and fresh_instance().

protocols::fldsgn::filters::FragQualFilter::FragQualFilter

(

FragQualFilter const &

rval)

virtual protocols::fldsgn::filters::FragQualFilter::~FragQualFilter ( )

inlinevirtual

Member Function Documentation

bool protocols::fldsgn::filters::FragQualFilter::apply ( Pose const &  pose) const

virtual

Returns true if the given pose passes the filter, false otherwise.

Implements protocols::filters::Filter.

References compute(), filtered_value_, and tr().

virtual FilterOP protocols::fldsgn::filters::FragQualFilter::clone ( ) const

inlinevirtual

Implements protocols::filters::Filter.

References FragQualFilter().

FragQualFilter::Real protocols::fldsgn::filters::FragQualFilter::compute

(

Pose const &

pose)

const

References filtered_type_, core::pose::Pose::metric(), and protocols::filters::Filter::score().

Referenced by apply(), report(), and report_sm().

void protocols::fldsgn::filters::FragQualFilter::filtered_type

(

String const &

ss)

References filtered_type_.

void protocols::fldsgn::filters::FragQualFilter::filtered_value

(

Real const &

ss)

References filtered_value_.

virtual FilterOP protocols::fldsgn::filters::FragQualFilter::fresh_instance ( ) const

inlinevirtual

Implements protocols::filters::Filter.

References FragQualFilter().

virtual std::string protocols::fldsgn::filters::FragQualFilter::name ( ) const

inlinevirtual

Reimplemented from protocols::filters::Filter.

void protocols::fldsgn::filters::FragQualFilter::parse_my_tag ( TagPtr const  tag, DataMap &  data, Filters_map const &  filters, Movers_map const &  movers, Pose const &  pose  )

virtual

parse xml

Reimplemented from protocols::filters::Filter.

References filtered_type_, filtered_value_, and tr().

void protocols::fldsgn::filters::FragQualFilter::report ( std::ostream &  out, Pose const &  pose  ) const

virtual

used to report score

Reimplemented from protocols::filters::Filter.

References compute().

FragQualFilter::Real protocols::fldsgn::filters::FragQualFilter::report_sm ( Pose const &  ) const

virtual

used to report filter internals through a score or silent file

Reimplemented from protocols::filters::Filter.

References compute().

Member Data Documentation

String protocols::fldsgn::filters::FragQualFilter::filtered_type_

private

Referenced by compute(), filtered_type(), and parse_my_tag().

Real protocols::fldsgn::filters::FragQualFilter::filtered_value_

private

Referenced by apply(), filtered_value(), and parse_my_tag().

Real protocols::fldsgn::filters::FragQualFilter::rmsd_cutoff_

private

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The documentation for this class was generated from the following files:

• src/protocols/fldsgn/filters/FragQualFilter.hh
• src/protocols/fldsgn/filters/FragQualFilter.cc