atom(Size const index) const | core::pack::dunbrack::DunbrackConstraint | virtual |
atom_ids_ | core::pack::dunbrack::DunbrackConstraint | private |
AtomID typedef | core::scoring::constraints::Constraint | |
bonus_ | core::pack::dunbrack::DunbrackConstraint | private |
choose_effective_sequence_separation(core::kinematics::ShortestPathInFoldTree const &sp, numeric::random::RandomGenerator &) | core::scoring::constraints::Constraint | inlinevirtual |
clone() const | core::pack::dunbrack::DunbrackConstraint | virtual |
core::scoring::constraints::Constraint::clone(FuncOP) const | core::scoring::constraints::Constraint | inlinevirtual |
Constraint(ScoreType const &t) | core::scoring::constraints::Constraint | inline |
dist(core::pose::Pose const &) const | core::scoring::constraints::Constraint | inlinevirtual |
dist(XYZ_Func const &) const | core::scoring::constraints::Constraint | inlinevirtual |
DunbrackConstraint() | core::pack::dunbrack::DunbrackConstraint | |
effective_sequence_separation(core::kinematics::ShortestPathInFoldTree const &) const | core::scoring::constraints::Constraint | inlinevirtual |
fill_f1_f2(AtomID const &atom, scoring::constraints::XYZ_Func const &xyz, Vector &F1, Vector &F2, scoring::EnergyMap const &weights) const | core::pack::dunbrack::DunbrackConstraint | virtual |
get_func() const | core::scoring::constraints::Constraint | inlinevirtual |
natoms() const | core::pack::dunbrack::DunbrackConstraint | virtual |
operator!=(Constraint const &other) const | core::scoring::constraints::Constraint | inline |
operator==(Constraint const &) const | core::scoring::constraints::Constraint | inlinevirtual |
read_constraint(std::istream &, core::pose::Pose const &) | core::scoring::constraints::Constraint | inlinevirtual |
read_data(std::istream &) | core::scoring::constraints::Constraint | inlinevirtual |
read_def(std::istream &in, pose::Pose const &pose, scoring::constraints::FuncFactory const &func_factory) | core::pack::dunbrack::DunbrackConstraint | virtual |
remap_resid(core::id::SequenceMapping const &) const | core::scoring::constraints::Constraint | inlinevirtual |
remapped_clone(pose::Pose const &, pose::Pose const &, id::SequenceMappingCOP map=NULL) const | core::scoring::constraints::Constraint | inlinevirtual |
residues() const | core::scoring::constraints::Constraint | virtual |
rot_bin_ | core::pack::dunbrack::DunbrackConstraint | private |
rot_vec_pos_ | core::pack::dunbrack::DunbrackConstraint | private |
score(scoring::constraints::XYZ_Func const &xyz_func, scoring::EnergyMap const &weights, scoring::EnergyMap &emap) const | core::pack::dunbrack::DunbrackConstraint | virtual |
core::scoring::constraints::Constraint::score(conformation::Conformation const &) const | core::scoring::constraints::Constraint | inlinevirtual |
score_type() const | core::scoring::constraints::Constraint | inline |
seqpos_ | core::pack::dunbrack::DunbrackConstraint | private |
setup_for_derivatives(XYZ_Func const &, ScoreFunction const &) const | core::scoring::constraints::Constraint | inlinevirtual |
setup_for_scoring(XYZ_Func const &, ScoreFunction const &) const | core::scoring::constraints::Constraint | inlinevirtual |
show(std::ostream &out) const | core::pack::dunbrack::DunbrackConstraint | virtual |
show_def(std::ostream &, pose::Pose const &) const | core::scoring::constraints::Constraint | inlinevirtual |
show_violations(std::ostream &out, pose::Pose const &, Size, Real threshold=1) const | core::scoring::constraints::Constraint | virtual |
steal_def(pose::Pose const &) | core::scoring::constraints::Constraint | inlinevirtual |
to_string() const | core::scoring::constraints::Constraint | inline |
type() const | core::pack::dunbrack::DunbrackConstraint | virtual |
~Constraint() | core::scoring::constraints::Constraint | virtual |
~DunbrackConstraint() | core::pack::dunbrack::DunbrackConstraint | virtual |