cached_score(FragmentCandidateOP, FragmentScoreMapOP) | protocols::frag_picker::scores::PCS_FragDistance | virtual |
cached_scores_id_ | protocols::frag_picker::scores::PCS_FragDistance | private |
CachingScoringMethod(Size priority, Real lowest_acceptable_value, bool use_lowest, std::string name) | protocols::frag_picker::scores::CachingScoringMethod | inline |
chunk_ca_distances_ | protocols::frag_picker::scores::PCS_FragDistance | private |
clean_up() | protocols::frag_picker::scores::PCS_FragDistance | virtual |
do_caching(VallChunkOP) | protocols::frag_picker::scores::PCS_FragDistance | virtual |
FragmentScoringMethod(Size priority, Real lowest_acceptable_value, bool use_lowest, std::string name) | protocols::frag_picker::scores::FragmentScoringMethod | inline |
get_id() | protocols::frag_picker::scores::FragmentScoringMethod | inline |
get_min_allowed_score() | protocols::frag_picker::scores::FragmentScoringMethod | inline |
get_priority() | protocols::frag_picker::scores::FragmentScoringMethod | inline |
get_score_name() | protocols::frag_picker::scores::FragmentScoringMethod | inline |
get_use_lowest() | protocols::frag_picker::scores::FragmentScoringMethod | inline |
id_ | protocols::frag_picker::scores::FragmentScoringMethod | protected |
largest_fragment_ | protocols::frag_picker::scores::PCS_FragDistance | private |
lowest_acceptable_value_ | protocols::frag_picker::scores::FragmentScoringMethod | protected |
max_length_ | protocols::frag_picker::scores::PCS_FragDistance | private |
n_res_ | protocols::frag_picker::scores::PCS_FragDistance | private |
name_ | protocols::frag_picker::scores::FragmentScoringMethod | protected |
PCS_FragDistance(Size priority, Real lowest_acceptable_value, bool use_lowest, ObjexxFCL::FArray2D_double target_ca_dev, ObjexxFCL::FArray2D_double target_ca_dist, Size largest_fragment, Size max_length) | protocols::frag_picker::scores::PCS_FragDistance | |
priority_ | protocols::frag_picker::scores::FragmentScoringMethod | protected |
score(FragmentCandidateOP, FragmentScoreMapOP) | protocols::frag_picker::scores::PCS_FragDistance | virtual |
set_id(Size id) | protocols::frag_picker::scores::FragmentScoringMethod | inline |
set_min_allowed_score(Real lowest_acceptable_value) | protocols::frag_picker::scores::FragmentScoringMethod | inline |
target_ca_dev_ | protocols::frag_picker::scores::PCS_FragDistance | private |
target_ca_dist_ | protocols::frag_picker::scores::PCS_FragDistance | private |
use_lowest_ | protocols::frag_picker::scores::FragmentScoringMethod | protected |