protocols::forge::build::BuildManager Member List

This is the complete list of members for protocols::forge::build::BuildManager, including all inherited members.

add(BuildInstructionOP bi)	protocols::forge::build::BuildManager
begin() const	protocols::forge::build::BuildManager	inline
BIOPConstIterator typedef	protocols::forge::build::BuildManager
BIOPIterator typedef	protocols::forge::build::BuildManager
BuildInstructionOPs typedef	protocols::forge::build::BuildManager
BuildManager()	protocols::forge::build::BuildManager
BuildManager(BuildManager const &rval)	protocols::forge::build::BuildManager
clear()	protocols::forge::build::BuildManager
clear_dependencies()	protocols::forge::build::BuildManager
clone() const	protocols::forge::build::BuildManager	virtual
compatibility_check() const	protocols::forge::build::BuildManager
create() const	protocols::forge::build::BuildManager	virtual
create_directed_dependency(BuildInstructionOP u, BuildInstructionOP v)	protocols::forge::build::BuildManager
defined_positions() const	protocols::forge::build::BuildManager
dependencies_exist() const	protocols::forge::build::BuildManager	inline
DependencyEdge typedef	protocols::forge::build::BuildManager
DependencyEdges typedef	protocols::forge::build::BuildManager
dummy_modify(Size const nres)	protocols::forge::build::BuildManager
empty() const	protocols::forge::build::BuildManager	inline
end() const	protocols::forge::build::BuildManager	inline
find_dependency(BuildInstructionCOP u, BuildInstructionCOP v)	protocols::forge::build::BuildManager	private
find_dependency(BuildInstructionCOP u, BuildInstructionCOP v) const	protocols::forge::build::BuildManager	private
find_instruction(BuildInstructionCOP u)	protocols::forge::build::BuildManager	private
find_instruction(BuildInstructionCOP u) const	protocols::forge::build::BuildManager	private
instruction_dependencies_	protocols::forge::build::BuildManager	private
instructions_	protocols::forge::build::BuildManager	private
Interval2Interval typedef	protocols::forge::build::BuildManager
Interval2MoveMap typedef	protocols::forge::build::BuildManager
Interval2Positions typedef	protocols::forge::build::BuildManager
intervals() const	protocols::forge::build::BuildManager
intervals_containing_defined_positions() const	protocols::forge::build::BuildManager
intervals_containing_new_positions() const	protocols::forge::build::BuildManager
intervals_containing_preexisting_positions() const	protocols::forge::build::BuildManager
intervals_containing_undefined_positions() const	protocols::forge::build::BuildManager
intervals_without_valid_original_equivalents() const	protocols::forge::build::BuildManager
Modified2Original typedef	protocols::forge::build::BuildManager
modified2original_interval_endpoints() const	protocols::forge::build::BuildManager
modified2original_intervals() const	protocols::forge::build::BuildManager
modified_i2p_defined() const	protocols::forge::build::BuildManager
modified_i2p_new() const	protocols::forge::build::BuildManager
modified_i2p_preexisting() const	protocols::forge::build::BuildManager
modified_i2p_undefined() const	protocols::forge::build::BuildManager
modified_interval2movemap() const	protocols::forge::build::BuildManager
modify(Pose &pose)	protocols::forge::build::BuildManager
modify_was_successful_	protocols::forge::build::BuildManager	private
MoveMap typedef	protocols::forge::build::BuildManager
movemap() const	protocols::forge::build::BuildManager
movemap_as_OP() const	protocols::forge::build::BuildManager
MoveMapOP typedef	protocols::forge::build::BuildManager
n_dependencies() const	protocols::forge::build::BuildManager	inline
new_positions() const	protocols::forge::build::BuildManager
operator=(BuildManager const &rval)	protocols::forge::build::BuildManager
Original2Modified typedef	protocols::forge::build::BuildManager
original2modified() const	protocols::forge::build::BuildManager
original2modified_	protocols::forge::build::BuildManager	private
original2modified_interval_endpoints() const	protocols::forge::build::BuildManager
original2modified_intervals() const	protocols::forge::build::BuildManager
original_deleted_positions() const	protocols::forge::build::BuildManager
original_i2p_deleted() const	protocols::forge::build::BuildManager
original_i2p_kept() const	protocols::forge::build::BuildManager
original_intervals_containing_deleted_positions() const	protocols::forge::build::BuildManager
original_intervals_containing_kept_positions() const	protocols::forge::build::BuildManager
original_kept_positions() const	protocols::forge::build::BuildManager
Pose typedef	protocols::forge::build::BuildManager
Positions typedef	protocols::forge::build::BuildManager
positions() const	protocols::forge::build::BuildManager
preexisting_positions() const	protocols::forge::build::BuildManager
reconstruct_dependencies(DependencyEdges const &dependency_list)	protocols::forge::build::BuildManager	private
reset_accounting()	protocols::forge::build::BuildManager
seqmap_	protocols::forge::build::BuildManager	private
sequence_mapping() const	protocols::forge::build::BuildManager
SequenceMapping typedef	protocols::forge::build::BuildManager
SequenceMappingCOP typedef	protocols::forge::build::BuildManager
SequenceMappingOP typedef	protocols::forge::build::BuildManager
size() const	protocols::forge::build::BuildManager	inline
Size typedef	protocols::forge::build::BuildManager
String typedef	protocols::forge::build::BuildManager
Super typedef	protocols::forge::build::BuildManager	private
undefined_positions() const	protocols::forge::build::BuildManager
union_of_intervals_containing_undefined_positions() const	protocols::forge::build::BuildManager
~BuildManager()	protocols::forge::build::BuildManager	virtual