add_suckers(core::pose::Pose &pose) | protocols::simple_moves::AddCavitiesMover | |
AddCavitiesMover(core::Size max_cav=100, core::Real min_size=1.2, core::Size min_nb=150, core::Real min_sep=3.0) | protocols::simple_moves::AddCavitiesMover | |
apply(core::pose::Pose &pose) | protocols::simple_moves::AddCavitiesMover | virtual |
protocols::moves::Mover::apply(core::io::serialization::PipeMap &pmap) | protocols::moves::Mover | virtual |
clear_info() | protocols::moves::Mover | inlinevirtual |
clear_suckers(core::pose::Pose &pose) | protocols::simple_moves::AddCavitiesMover | |
clone() const | protocols::moves::Mover | virtual |
create() | protocols::moves::Mover | virtual |
Filters_map typedef | protocols::moves::Mover | |
fresh_instance() const | protocols::moves::Mover | virtual |
get_additional_output() | protocols::moves::Mover | virtual |
get_cavities(core::pose::Pose &pose, core::Real nbdis, int nbcount, core::Real minsep) | protocols::simple_moves::AddCavitiesMover | protected |
get_closest_heavy_atom(core::pose::Pose &pose, numeric::xyzVector< core::Real > xyz) | protocols::simple_moves::AddCavitiesMover | protected |
get_current_job() const | protocols::moves::Mover | |
get_current_tag() const | protocols::moves::Mover | inline |
get_input_pose() const | protocols::moves::Mover | |
get_last_move_status() const | protocols::moves::Mover | |
get_name() const | protocols::simple_moves::AddCavitiesMover | virtual |
get_native_pose() const | protocols::moves::Mover | |
get_suck_res() | protocols::simple_moves::AddCavitiesMover | protected |
get_type() const | protocols::moves::Mover | inline |
info() | protocols::moves::Mover | inlinevirtual |
info() const | protocols::moves::Mover | inlinevirtual |
last_proposal_density_ratio() | protocols::moves::Mover | inlinevirtual |
max_cav_ | protocols::simple_moves::AddCavitiesMover | protected |
min_nb_ | protocols::simple_moves::AddCavitiesMover | protected |
min_sep_ | protocols::simple_moves::AddCavitiesMover | protected |
min_size_ | protocols::simple_moves::AddCavitiesMover | protected |
Mover() | protocols::moves::Mover | |
Mover(std::string const &type_name) | protocols::moves::Mover | |
Mover(Mover const &other) | protocols::moves::Mover | |
name() | protocols::moves::Mover | inlinestatic |
operator=(Mover const &other) | protocols::moves::Mover | |
opts | protocols::simple_moves::AddCavitiesMover | protected |
parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks, MoverCacheSP cache) | protocols::moves::Mover | virtual |
parse_my_tag(TagPtr const tag, DataMap &data, Filters_map const &filters, Movers_map const &movers, Pose const &pose) | protocols::moves::Mover | virtual |
parse_state(SerializableState const &state) | protocols::moves::Mover | virtual |
Pose typedef | protocols::moves::Mover | |
PoseCOP typedef | protocols::moves::Mover | |
register_options() | protocols::moves::Mover | inlinestatic |
reinitialize_for_each_job() const | protocols::moves::Mover | virtual |
reinitialize_for_new_input() const | protocols::moves::Mover | virtual |
reset_status() | protocols::moves::Mover | |
save_state(SerializableState &state) | protocols::moves::Mover | virtual |
set_current_job(protocols::jobdist::BasicJobCOP job) | protocols::moves::Mover | |
set_current_tag(std::string const &new_tag) | protocols::moves::Mover | inline |
set_input_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
set_last_move_status(MoverStatus status) | protocols::moves::Mover | protected |
set_native_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
Strings typedef | protocols::moves::Mover | |
TagPtr typedef | protocols::moves::Mover | |
test_move(Pose &pose) | protocols::moves::Mover | inlinevirtual |
type() const | protocols::moves::Mover | inline |
type(const std::string &type_in) | protocols::moves::Mover | inline |
~Mover() | protocols::moves::Mover | virtual |