PointMutScanDriver.cc File Reference

A protocol that tries to find stability enhancing mutations. More...

#include <protocols/pmut_scan/PointMutScanDriver.hh>
#include <protocols/pmut_scan/Mutant.hh>
#include <basic/MetricValue.hh>
#include <basic/Tracer.hh>
#include <basic/options/util.hh>
#include <core/chemical/AA.hh>
#include <core/conformation/Residue.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/graph/Graph.hh>
#include <core/conformation/PointGraph.hh>
#include <core/conformation/find_neighbors.hh>
#include <core/pack/task/PackerTask.hh>
#include <core/pack/task/operation/TaskOperation.hh>
#include <core/pack/task/operation/TaskOperations.hh>
#include <core/pack/task/TaskFactory.hh>
#include <core/pose/Pose.hh>
#include <core/pose/PDBInfo.hh>
#include <core/pose/metrics/CalculatorFactory.hh>
#include <core/import_pose/import_pose.hh>
#include <core/scoring/EnergyMap.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/ScoreType.hh>
#include <core/scoring/hbonds/HBondOptions.hh>
#include <core/scoring/methods/EnergyMethodOptions.hh>
#include <protocols/simple_moves/PackRotamersMover.hh>
#include <protocols/simple_moves/MinMover.hh>
#include <protocols/moves/MoverContainer.hh>
#include <protocols/simple_moves/TaskAwareMinMover.hh>
#include <protocols/toolbox/pose_metric_calculators/NeighborsByDistanceCalculator.hh>
#include <protocols/toolbox/task_operations/RestrictToNeighborhoodOperation.hh>
#include <utility/file/FileName.hh>
#include <ObjexxFCL/format.hh>
#include <iostream>
#include <fstream>
#include <string>
#include <basic/options/keys/run.OptionKeys.gen.hh>
#include <core/conformation/PointGraphData.hh>
#include <core/graph/UpperEdgeGraph.hh>
#include <utility/vector0.hh>
#include <utility/vector1.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::pmut_scan

Constant Groups
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::pmut_scan

Functions
static basic::Tracer	protocols::pmut_scan::TR ("protocols.pmut_scan.PointMutScanDriver")

Detailed Description

A protocol that tries to find stability enhancing mutations.

Author

Ron Jacak (ron.j.nosp@m.acak.nosp@m.@gmai.nosp@m.l.co.nosp@m.m)