#include <InterfaceBindingEnergyDensityFilter.hh>

Inheritance diagram for protocols::simple_filters::InterfaceBindingEnergyDensityFilter:

Collaboration diagram for protocols::simple_filters::InterfaceBindingEnergyDensityFilter:

Public Member Functions
	InterfaceBindingEnergyDensityFilter ()

	InterfaceBindingEnergyDensityFilter (InterfaceSasaFilterOP sasa_filter, DdgFilterOP ddG_filter, core::Real threshold)

virtual	~InterfaceBindingEnergyDensityFilter ()

void	set_interface_sasa_filter (InterfaceSasaFilterOP sasa_filter)

void	set_ddG_filter (DdgFilterOP ddG_filter)

void	set_upper_threshold (core::Real threshold)

bool	apply (core::pose::Pose const &pose) const
	Returns true if the given pose passes the filter, false otherwise. More...

void	report (std::ostream &out, core::pose::Pose const &pose) const

core::Real	report_sm (core::pose::Pose const &pose) const
	used to report filter internals through a score or silent file More...

core::Real	compute (core::pose::Pose const &pose) const

filters::FilterOP	clone () const

filters::FilterOP	fresh_instance () const

void	parse_my_tag (utility::tag::TagPtr const tag, protocols::moves::DataMap &, filters::Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &)

Public Member Functions inherited from protocols::filters::Filter
	Filter ()

	Filter (std::string const &)

	Filter (Filter const &)

virtual	~Filter ()

virtual std::string	get_type () const

std::string	get_user_defined_name () const

void	set_user_defined_name (std::string const &name)

virtual void	clear ()
	used to clear internal variables if needed. Using fresh_instance is preferred since it's a pure virtual More...

virtual void	apply (core::io::serialization::PipeMap &pmap)

virtual void	score (core::io::serialization::PipeMap &pmap)

virtual core::Real	score (core::pose::Pose &pose)

virtual void	parse_def (utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks)

virtual std::string	name () const

Private Attributes
InterfaceSasaFilterOP	sasa_filter_

DdgFilterOP	ddG_filter_

core::Real	upper_threshold_

Additional Inherited Members
Protected Attributes inherited from protocols::filters::Filter
std::string	scorename_

Constructor & Destructor Documentation

protocols::simple_filters::InterfaceBindingEnergyDensityFilter::InterfaceBindingEnergyDensityFilter ( )

Referenced by clone().

protocols::simple_filters::InterfaceBindingEnergyDensityFilter::InterfaceBindingEnergyDensityFilter	(	InterfaceSasaFilterOP	sasa_filter,
		DdgFilterOP	ddG_filter,
		core::Real	threshold
	)

protocols::simple_filters::InterfaceBindingEnergyDensityFilter::~InterfaceBindingEnergyDensityFilter ( )

virtual

Member Function Documentation

bool protocols::simple_filters::InterfaceBindingEnergyDensityFilter::apply ( core::pose::Pose const & pose) const

virtual

Returns true if the given pose passes the filter, false otherwise.

Implements protocols::filters::Filter.

References ddG_filter_, sasa_filter_, protocols::simple_filters::TR(), and upper_threshold_.

filters::FilterOP protocols::simple_filters::InterfaceBindingEnergyDensityFilter::clone ( ) const

virtual

Implements protocols::filters::Filter.

References InterfaceBindingEnergyDensityFilter().

core::Real protocols::simple_filters::InterfaceBindingEnergyDensityFilter::compute ( core::pose::Pose const & pose) const

References ddG_filter_, and sasa_filter_.

filters::FilterOP protocols::simple_filters::InterfaceBindingEnergyDensityFilter::fresh_instance ( ) const

virtual

Implements protocols::filters::Filter.

void protocols::simple_filters::InterfaceBindingEnergyDensityFilter::parse_my_tag	(	utility::tag::TagPtr const	tag,
		protocols::moves::DataMap &	,
		filters::Filters_map const &	filters_map,
		protocols::moves::Movers_map const &	,
		core::pose::Pose const &
	)

virtual

Reimplemented from protocols::filters::Filter.

References ddG_filter_, sasa_filter_, and upper_threshold_.

void protocols::simple_filters::InterfaceBindingEnergyDensityFilter::report	(	std::ostream &	out,
		core::pose::Pose const &	pose
	)		const

virtual

Reimplemented from protocols::filters::Filter.

References ddG_filter_, and sasa_filter_.

core::Real protocols::simple_filters::InterfaceBindingEnergyDensityFilter::report_sm ( core::pose::Pose const & ) const

virtual

used to report filter internals through a score or silent file

Reimplemented from protocols::filters::Filter.

References ddG_filter_, and sasa_filter_.

void protocols::simple_filters::InterfaceBindingEnergyDensityFilter::set_ddG_filter ( DdgFilterOP ddG_filter)

References ddG_filter_.

void protocols::simple_filters::InterfaceBindingEnergyDensityFilter::set_interface_sasa_filter ( InterfaceSasaFilterOP sasa_filter)

References sasa_filter_.

void protocols::simple_filters::InterfaceBindingEnergyDensityFilter::set_upper_threshold ( core::Real threshold)

References upper_threshold_.

Member Data Documentation

DdgFilterOP protocols::simple_filters::InterfaceBindingEnergyDensityFilter::ddG_filter_

private

Referenced by apply(), compute(), parse_my_tag(), report(), report_sm(), and set_ddG_filter().

InterfaceSasaFilterOP protocols::simple_filters::InterfaceBindingEnergyDensityFilter::sasa_filter_

private

Referenced by apply(), compute(), parse_my_tag(), report(), report_sm(), and set_interface_sasa_filter().

core::Real protocols::simple_filters::InterfaceBindingEnergyDensityFilter::upper_threshold_

private

Referenced by apply(), parse_my_tag(), and set_upper_threshold().

The documentation for this class was generated from the following files:

src/protocols/simple_filters/InterfaceBindingEnergyDensityFilter.hh
src/protocols/simple_filters/InterfaceBindingEnergyDensityFilter.cc

Public Member Functions

Private Attributes

Additional Inherited Members

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation