| active_constraint() const | core::scoring::constraints::AmbiguousConstraint | |
| add_individual_constraint(ConstraintCOP cst_in) | core::scoring::constraints::MultiConstraint | virtual |
| AmbiguousConstraint() | core::scoring::constraints::AmbiguousConstraint | |
| AmbiguousConstraint(ConstraintCOPs &cst_in) | core::scoring::constraints::AmbiguousConstraint | |
| atom(Size const n) const | core::scoring::constraints::MultiConstraint | inlinevirtual |
| AtomID typedef | core::scoring::constraints::Constraint | |
| calculate_total_cst_score(EnergyMap const &weights, EnergyMap &emap) const | core::scoring::constraints::AmbiguousConstraint | |
| choose_effective_sequence_separation(core::kinematics::ShortestPathInFoldTree const &sp, numeric::random::RandomGenerator &) | core::scoring::constraints::MultiConstraint | virtual |
| clone() const | core::scoring::constraints::SiteConstraintResidues | inlinevirtual |
| core::scoring::constraints::Constraint::clone(FuncOP) const | core::scoring::constraints::Constraint | inlinevirtual |
| Constraint(ScoreType const &t) | core::scoring::constraints::Constraint | inline |
| dist(core::pose::Pose const &) const | core::scoring::constraints::Constraint | inlinevirtual |
| dist(XYZ_Func const &) const | core::scoring::constraints::Constraint | inlinevirtual |
| effective_sequence_separation(core::kinematics::ShortestPathInFoldTree const &) const | core::scoring::constraints::MultiConstraint | inlinevirtual |
| empty_clone() const | core::scoring::constraints::AmbiguousConstraint | inlinevirtual |
| fill_f1_f2(AtomID const &atom, XYZ_Func const &xyz, Vector &F1, Vector &F2, EnergyMap const &weights) const | core::scoring::constraints::AmbiguousConstraint | virtual |
| get_func() const | core::scoring::constraints::Constraint | inlinevirtual |
| init_cst_score_types() | core::scoring::constraints::AmbiguousConstraint | |
| member_constraints() const | core::scoring::constraints::MultiConstraint | inline |
| member_constraints_ | core::scoring::constraints::MultiConstraint | protected |
| MultiConstraint(ScoreType const &t=dof_constraint) | core::scoring::constraints::MultiConstraint | inline |
| MultiConstraint(const ConstraintCOPs &cst_in, ScoreType const &t=dof_constraint) | core::scoring::constraints::MultiConstraint | |
| natoms() const | core::scoring::constraints::MultiConstraint | inlinevirtual |
| operator!=(Constraint const &other) const | core::scoring::constraints::Constraint | inline |
| operator==(Constraint const &other) const | core::scoring::constraints::AmbiguousConstraint | virtual |
| read_constraint(std::istream &, core::pose::Pose const &) | core::scoring::constraints::Constraint | inlinevirtual |
| read_data(std::istream &) | core::scoring::constraints::Constraint | inlinevirtual |
| read_def(std::istream &data, pose::Pose const &pose, FuncFactory const &func_factory) | core::scoring::constraints::SiteConstraintResidues | virtual |
| remap_resid(core::id::SequenceMapping const &seqmap) const | core::scoring::constraints::AmbiguousConstraint | virtual |
| remapped_clone(pose::Pose const &, pose::Pose const &, id::SequenceMappingCOP map=NULL) const | core::scoring::constraints::MultiConstraint | virtual |
| residues() const | core::scoring::constraints::MultiConstraint | inlinevirtual |
| score(XYZ_Func const &xyz_func, EnergyMap const &weights, EnergyMap &emap) const | core::scoring::constraints::AmbiguousConstraint | virtual |
| core::scoring::constraints::Constraint::score(conformation::Conformation const &) const | core::scoring::constraints::Constraint | inlinevirtual |
| score_type() const | core::scoring::constraints::Constraint | inline |
| set_effective_sequence_separation(core::Size setting) | core::scoring::constraints::MultiConstraint | inline |
| setup_csts(Size res1, std::string name, Size res2, Size res3, core::pose::Pose const &pose, FuncOP const &func) | core::scoring::constraints::SiteConstraintResidues | |
| setup_for_derivatives(XYZ_Func const &, ScoreFunction const &) const | core::scoring::constraints::Constraint | inlinevirtual |
| setup_for_scoring(XYZ_Func const &, ScoreFunction const &) const | core::scoring::constraints::MultiConstraint | virtual |
| show(std::ostream &out) const | core::scoring::constraints::SiteConstraintResidues | virtual |
| show_def(std::ostream &out, pose::Pose const &pose) const | core::scoring::constraints::MultiConstraint | virtual |
| show_violations(std::ostream &out, pose::Pose const &pose, Size verbose_level, Real threshold=1.0) const | core::scoring::constraints::AmbiguousConstraint | virtual |
| SiteConstraintResidues() | core::scoring::constraints::SiteConstraintResidues | |
| SiteConstraintResidues(ConstraintCOPs &cst_in) | core::scoring::constraints::SiteConstraintResidues | |
| size() const | core::scoring::constraints::MultiConstraint | inline |
| steal_def(pose::Pose const &) | core::scoring::constraints::Constraint | inlinevirtual |
| to_string() const | core::scoring::constraints::Constraint | inline |
| type() const | core::scoring::constraints::SiteConstraintResidues | inlinevirtual |
| ~Constraint() | core::scoring::constraints::Constraint | virtual |
1.8.4