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core::sequence::ExtendAlignerSW Member List

This is the complete list of members for core::sequence::ExtendAlignerSW, including all inherited members.

align(SequenceOP seq_y, SequenceOP seq_x, ScoringSchemeOP ss)core::sequence::ExtendAlignerSWvirtual
Aligner()core::sequence::Alignerinline
ExtendAlignerSW()core::sequence::ExtendAlignerSWinline
traceback(SequenceOP seq_x, SequenceOP seq_y, DP_Matrix matrix, CellOP start)core::sequence::Aligner
validate_input(SequenceOP seq_y, SequenceOP seq_x, ScoringSchemeOP ss)core::sequence::Aligner
~Aligner()core::sequence::Alignerinlinevirtual
~ExtendAlignerSW()core::sequence::ExtendAlignerSWinlinevirtual
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