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protocols::jd2::LazySilentFileJobInputter Class Reference

#include <LazySilentFileJobInputter.hh>

Inheritance diagram for protocols::jd2::LazySilentFileJobInputter:
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Collaboration diagram for protocols::jd2::LazySilentFileJobInputter:
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Public Member Functions

 LazySilentFileJobInputter ()
 
virtual ~LazySilentFileJobInputter ()
 
virtual void pose_from_job (core::pose::Pose &pose, JobOP job)
 this function is responsible for filling the pose reference with the pose indicated by the job. The Job object (within its InnerJob) contains a PoseCOP. This function needs to either fill the pose reference from the InnerJob or, on first demand of a pose from that InnerJob, instantiate the pose, hand off a COP to the InnerJob, and fill the reference. More...
 
virtual
core::io::silent::SilentStruct
const & 
struct_from_job (JobOP job)
 
virtual void fill_jobs (Jobs &jobs)
 this function determines what jobs exist. This function neither knows nor cares what jobs are already complete on disk/memory - it just figures out what ones should exist given the input. NOTE: your JobInputter should order Job objects in the Jobs vector to have as few "transitions" between inputs as possible (group all Jobs of the same input next to each other). This improves efficiency of the "FAIL_BAD_INPUT" functionality. Note I said "should", not "must". More...
 
virtual
JobInputterInputSource::Enum 
input_source () const
 return the type of input source that the JobInputter is currently using More...
 
core::io::silent::SilentFileData
const & 
silent_file_data () const
 
- Public Member Functions inherited from protocols::jd2::JobInputter
virtual ~JobInputter ()
 

Private Attributes

core::io::silent::SilentFileData sfd_
 

Additional Inherited Members

- Static Public Member Functions inherited from protocols::jd2::JobInputter
static std::string job_inputter_input_source_to_string (JobInputterInputSource::Enum source)
 call this with input_source() to get the input source of a particular job inputter More...
 
- Protected Member Functions inherited from protocols::jd2::JobInputter
void load_pose_into_job (core::pose::Pose const &pose, JobOP job)
 this function modifies the InnerJob's pose. Access to that pose is via friendship. More...
 
void load_pose_into_job (core::pose::PoseCOP pose, JobOP job)
 this function modifies the InnerJob's pose. Access to that pose is via friendship. More...
 
virtual core::Size get_nstruct () const
 this code is here to restrict the use of inner_job_nonconst (this class is a friend class and can do it) More...
 

Constructor & Destructor Documentation

protocols::jd2::LazySilentFileJobInputter::LazySilentFileJobInputter ( )

References protocols::jd2::tr().

protocols::jd2::LazySilentFileJobInputter::~LazySilentFileJobInputter ( )
virtual

Member Function Documentation

void protocols::jd2::LazySilentFileJobInputter::fill_jobs ( Jobs jobs)
virtual

this function determines what jobs exist. This function neither knows nor cares what jobs are already complete on disk/memory - it just figures out what ones should exist given the input. NOTE: your JobInputter should order Job objects in the Jobs vector to have as few "transitions" between inputs as possible (group all Jobs of the same input next to each other). This improves efficiency of the "FAIL_BAD_INPUT" functionality. Note I said "should", not "must".

Implements protocols::jd2::JobInputter.

References protocols::jd2::tr().

JobInputterInputSource::Enum protocols::jd2::LazySilentFileJobInputter::input_source ( ) const
virtual

return the type of input source that the JobInputter is currently using

Implements protocols::jd2::JobInputter.

References protocols::jd2::JobInputterInputSource::SILENT_FILE.

void protocols::jd2::LazySilentFileJobInputter::pose_from_job ( core::pose::Pose pose,
JobOP  job 
)
virtual

this function is responsible for filling the pose reference with the pose indicated by the job. The Job object (within its InnerJob) contains a PoseCOP. This function needs to either fill the pose reference from the InnerJob or, on first demand of a pose from that InnerJob, instantiate the pose, hand off a COP to the InnerJob, and fill the reference.

Implements protocols::jd2::JobInputter.

References core::pose::Pose::clear(), core::pose::tag_into_pose(), and protocols::jd2::tr().

core::io::silent::SilentFileData const& protocols::jd2::LazySilentFileJobInputter::silent_file_data ( ) const
inline

References sfd_.

core::io::silent::SilentStruct const & protocols::jd2::LazySilentFileJobInputter::struct_from_job ( JobOP  job)
virtual

Member Data Documentation

core::io::silent::SilentFileData protocols::jd2::LazySilentFileJobInputter::sfd_
private

Referenced by silent_file_data().


The documentation for this class was generated from the following files: