atomno_ | protocols::scoring::ImplicitFastClashCheck | private |
bbl_ | protocols::scoring::ImplicitFastClashCheck | private |
bbl_ca_ | protocols::scoring::ImplicitFastClashCheck | private |
clash_check(numeric::xyzVector< core::Real > const &pp) const | protocols::scoring::ImplicitFastClashCheck | |
clash_check(numeric::xyzVector< core::Real > const &pp, core::Size resno) const | protocols::scoring::ImplicitFastClashCheck | |
clash_check_test(numeric::xyzVector< core::Real > const &pp) const | protocols::scoring::ImplicitFastClashCheck | |
clash_check_trimer(core::pose::Pose const &pose, Size refrsd) const | protocols::scoring::ImplicitFastClashCheck | |
clash_count(numeric::xyzVector< core::Real > const &pp) const | protocols::scoring::ImplicitFastClashCheck | |
cube_dim_ | protocols::scoring::ImplicitFastClashCheck | private |
cube_dim_ca_ | protocols::scoring::ImplicitFastClashCheck | private |
cubes_ | protocols::scoring::ImplicitFastClashCheck | private |
cubes_ca_ | protocols::scoring::ImplicitFastClashCheck | private |
dump_debug_pdb(utility::io::ozstream &out, core::kinematics::Stub const &stub, char chain= 'Z') const | protocols::scoring::ImplicitFastClashCheck | |
dump_debug_pdb(std::string const &fname, core::kinematics::Stub const &stub, char chain= 'Z') const | protocols::scoring::ImplicitFastClashCheck | |
ImplicitFastClashCheck(core::pose::Pose const &pose_in, core::Real clash_dis) | protocols::scoring::ImplicitFastClashCheck | |
ImplicitFastClashCheck(core::pose::Pose const &pose_in, core::Real clash_dis, utility::vector1< core::Size > ignore) | protocols::scoring::ImplicitFastClashCheck | |
ImplicitFastClashCheck(utility::vector1< core::pose::Pose > const &poses_in, core::Real clash_dis, utility::vector1< core::Size > ignore) | protocols::scoring::ImplicitFastClashCheck | |
init_clash_check(utility::vector1< core::pose::Pose > const &poses, core::Real neighbor_cutoff, utility::vector1< core::Size > ignore) | protocols::scoring::ImplicitFastClashCheck | |
neighbor_cutoff_ | protocols::scoring::ImplicitFastClashCheck | private |
neighbor_cutoff_ca_ | protocols::scoring::ImplicitFastClashCheck | private |
neighbor_cutoff_sq_ | protocols::scoring::ImplicitFastClashCheck | private |
neighbor_cutoff_sq_ca_ | protocols::scoring::ImplicitFastClashCheck | private |
points_ | protocols::scoring::ImplicitFastClashCheck | private |
pose_ | protocols::scoring::ImplicitFastClashCheck | private |
resno_ | protocols::scoring::ImplicitFastClashCheck | private |
side_inv_ | protocols::scoring::ImplicitFastClashCheck | private |
side_inv_ca_ | protocols::scoring::ImplicitFastClashCheck | private |
size() | protocols::scoring::ImplicitFastClashCheck | inline |
~ImplicitFastClashCheck() | protocols::scoring::ImplicitFastClashCheck | virtual |