apply(Pose &) | protocols::simple_moves::BBConRotMover | virtual |
protocols::simple_moves::BBGaussianMover::apply(core::io::serialization::PipeMap &pmap) | protocols::moves::Mover | virtual |
available_seg_list_ | protocols::simple_moves::BBGaussianMover | protected |
BBConRotMover() | protocols::simple_moves::BBConRotMover | |
BBGaussianMover(Size, Size, Size) | protocols::simple_moves::BBGaussianMover | |
calc_jacobian_cartesians(Vector const &, Vector const &, Vector const &, Vector const &, Vector const &) | protocols::simple_moves::BBConRotMover | private |
cholesky_bw(Matrix &, Size, utility::vector1< Real > &, utility::vector1< Real > &, Size from=1, Size to=0, Real scale=1.0) | protocols::simple_moves::BBGaussianMover | protected |
cholesky_fw(Matrix &, Size, utility::vector1< Real > &, utility::vector1< Real > &, Size from=1, Size to=0, Real scale=1.0) | protocols::simple_moves::BBGaussianMover | protected |
clear_info() | protocols::moves::Mover | inlinevirtual |
clone() const | protocols::moves::Mover | virtual |
closure(Vector &r0, Vector &r1, Vector &r2, Vector &r3, Vector &r4, Vector &r5, Vector &r6, Vector &p1, Vector &p2, Vector &p3, Real const theta1_old, Real const theta2_old, Real const theta3_old, Real const theta4_old, Real const alpha1_old, Real const alpha2_old, Real const alpha3_old, Real &theta1, Real &theta2, Real &theta3, Real &theta4, Real &alpha1, Real &alpha2, Real &alpha3) | protocols::simple_moves::BBConRotMover | private |
create() | protocols::moves::Mover | virtual |
dphi | protocols::simple_moves::BBConRotMover | private |
factorA(core::Real const fA) | protocols::simple_moves::BBConRotMover | |
factorA_ | protocols::simple_moves::BBConRotMover | private |
factorB(core::Real const fB) | protocols::simple_moves::BBConRotMover | |
factorB_ | protocols::simple_moves::BBConRotMover | private |
factorC(core::Real const fC) | protocols::simple_moves::BBConRotMover | |
factorC_ | protocols::simple_moves::BBConRotMover | private |
Filters_map typedef | protocols::moves::Mover | |
fresh_instance() const | protocols::moves::Mover | virtual |
get_A() | protocols::simple_moves::BBConRotMover | protectedvirtual |
get_additional_output() | protocols::moves::Mover | virtual |
get_current_job() const | protocols::moves::Mover | |
get_current_tag() const | protocols::moves::Mover | inline |
get_determinant(double a[5][5], int n, double &det) | protocols::simple_moves::BBConRotMover | private |
get_dRdPhi(Vector const &r1, Vector const &r2, Vector const &r) | protocols::simple_moves::BBGaussianMover | inlineprotected |
get_dRdTheta(Vector const &r1, Vector const &r2, Vector const &r3, Vector const &r) | protocols::simple_moves::BBGaussianMover | inlineprotected |
get_G() | protocols::simple_moves::BBConRotMover | protectedvirtual |
get_input_pose() const | protocols::moves::Mover | |
get_L_move(Pose &) | protocols::simple_moves::BBConRotMover | protectedvirtual |
get_L_prime() | protocols::simple_moves::BBConRotMover | protectedvirtual |
get_last_move_status() const | protocols::moves::Mover | |
get_name() const | protocols::simple_moves::BBConRotMover | virtual |
get_native_pose() const | protocols::moves::Mover | |
get_type() const | protocols::moves::Mover | inline |
get_VdRdPhi(Pose const &) | protocols::simple_moves::BBConRotMover | protectedvirtual |
get_xyz(Vector const &a, Vector const &b, Vector const &c, Vector &d, Real distance, Real theta, Real phi) | protocols::simple_moves::BBConRotMover | private |
info() | protocols::moves::Mover | inlinevirtual |
info() const | protocols::moves::Mover | inlinevirtual |
last_proposal_density_ratio() const | protocols::simple_moves::BBGaussianMover | |
protocols::moves::Mover::last_proposal_density_ratio() | protocols::moves::Mover | inlinevirtual |
last_proposal_density_ratio_ | protocols::simple_moves::BBGaussianMover | protected |
make_move(Pose &) | protocols::simple_moves::BBConRotMover | protected |
Matrix typedef | protocols::simple_moves::BBGaussianMover | |
matrix_A | protocols::simple_moves::BBGaussianMover | protected |
matrix_dRdPhi | protocols::simple_moves::BBGaussianMover | protected |
matrix_G | protocols::simple_moves::BBGaussianMover | protected |
movemap() | protocols::simple_moves::BBGaussianMover | |
movemap(core::kinematics::MoveMapCOP new_movemap) | protocols::simple_moves::BBGaussianMover | |
movemap_ | protocols::simple_moves::BBGaussianMover | protected |
Mover() | protocols::moves::Mover | |
Mover(std::string const &type_name) | protocols::moves::Mover | |
Mover(Mover const &other) | protocols::moves::Mover | |
n_dof_angle_ | protocols::simple_moves::BBGaussianMover | protected |
n_end_atom_ | protocols::simple_moves::BBGaussianMover | protected |
n_pert_res_ | protocols::simple_moves::BBGaussianMover | protected |
name() | protocols::moves::Mover | inlinestatic |
oldphi | protocols::simple_moves::BBConRotMover | private |
operator=(Mover const &other) | protocols::moves::Mover | |
parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks, MoverCacheSP cache) | protocols::moves::Mover | virtual |
parse_my_tag(TagPtr const tag, DataMap &data, Filters_map const &filters, Movers_map const &movers, Pose const &pose) | protocols::moves::Mover | virtual |
parse_state(SerializableState const &state) | protocols::moves::Mover | virtual |
pivot_range_randomly(Pose &, Size, Size) | protocols::simple_moves::BBGaussianMover | protected |
Pose typedef | protocols::simple_moves::BBGaussianMover | |
PoseCOP typedef | protocols::simple_moves::BBGaussianMover | |
PoseOP typedef | protocols::simple_moves::BBGaussianMover | |
Real typedef | protocols::simple_moves::BBGaussianMover | |
register_options() | protocols::moves::Mover | inlinestatic |
reinitialize_for_each_job() const | protocols::moves::Mover | virtual |
reinitialize_for_new_input() const | protocols::moves::Mover | virtual |
reset_status() | protocols::moves::Mover | |
Residue typedef | protocols::simple_moves::BBGaussianMover | |
resnum_ | protocols::simple_moves::BBGaussianMover | protected |
save_state(SerializableState &state) | protocols::moves::Mover | virtual |
set_current_job(protocols::jobdist::BasicJobCOP job) | protocols::moves::Mover | |
set_current_tag(std::string const &new_tag) | protocols::moves::Mover | inline |
set_input_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
set_last_move_status(MoverStatus status) | protocols::moves::Mover | protected |
set_native_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
setup_list(Pose const &) | protocols::simple_moves::BBGaussianMover | protected |
Size typedef | protocols::simple_moves::BBGaussianMover | |
Strings typedef | protocols::moves::Mover | |
TagPtr typedef | protocols::moves::Mover | |
test_move(Pose &pose) | protocols::moves::Mover | inlinevirtual |
type() const | protocols::moves::Mover | inline |
type(const std::string &type_in) | protocols::moves::Mover | inline |
VdRdPhi typedef | protocols::simple_moves::BBGaussianMover | |
Vector typedef | protocols::simple_moves::BBGaussianMover | |
VMatrix typedef | protocols::simple_moves::BBGaussianMover | |
xyzMatrix typedef | protocols::simple_moves::BBConRotMover | |
~BBConRotMover() | protocols::simple_moves::BBConRotMover | |
~BBGaussianMover() | protocols::simple_moves::BBGaussianMover | |
~Mover() | protocols::moves::Mover | virtual |