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core::pack::annealer::FixbbSimAnnealer Member List

This is the complete list of members for core::pack::annealer::FixbbSimAnnealer, including all inherited members.

bestenergy()core::pack::annealer::SimAnnealerBaseprotected
bestrotamer_at_seqpos()core::pack::annealer::SimAnnealerBaseprotected
bestrotamer_at_seqpos() const core::pack::annealer::SimAnnealerBaseprotected
calc_freq_tempcore::pack::annealer::SimAnnealerBaseprotectedstatic
calc_rot_freq()core::pack::annealer::SimAnnealerBaseprotected
calc_rot_freq() const core::pack::annealer::SimAnnealerBaseprotected
clear()core::pack::annealer::SimAnnealerBaseprotected
current_rot_index()core::pack::annealer::SimAnnealerBaseprotected
current_rot_index() const core::pack::annealer::SimAnnealerBaseprotected
FixbbRotamerSetsCOP typedefcore::pack::annealer::RotamerAssigningAnnealer
FixbbSimAnnealer(utility::vector0< int > &rot_to_pack, ObjexxFCL::FArray1D_int &bestrotamer_at_seqpos, core::PackerEnergy &bestenergy, bool start_with_current, InteractionGraphBaseOP ig, FixbbRotamerSetsCOP rotamer_sets, ObjexxFCL::FArray1_int &current_rot_index, bool calc_rot_freq, ObjexxFCL::FArray1D< core::PackerEnergy > &rot_freq)core::pack::annealer::FixbbSimAnnealer
FixbbSimAnnealer(ObjexxFCL::FArray1D_int &bestrotamer_at_seqpos, core::PackerEnergy &bestenergy, bool start_with_current, InteractionGraphBaseOP ig, FixbbRotamerSetsCOP rotamer_sets, ObjexxFCL::FArray1_int &current_rot_index, bool calc_rot_freq, ObjexxFCL::FArray1D< core::PackerEnergy > &rot_freq)core::pack::annealer::FixbbSimAnnealer
FixbbSimAnnealer(const FixbbSimAnnealer &rhs)core::pack::annealer::FixbbSimAnnealerprivate
get_calc_rot_freq() const core::pack::annealer::SimAnnealerBase
get_hightemp() const core::pack::annealer::SimAnnealerBaseinlineprotected
get_inneriterations() const core::pack::annealer::SimAnnealerBase
get_lowtemp() const core::pack::annealer::SimAnnealerBaseinlineprotected
get_outeriterations() const core::pack::annealer::SimAnnealerBase
get_start_with_current() const core::pack::annealer::SimAnnealerBase
get_temperature() const core::pack::annealer::SimAnnealerBase
hightempcore::pack::annealer::SimAnnealerBaseprotectedstatic
ig_core::pack::annealer::FixbbSimAnnealerprivate
InteractionGraphBaseOP typedefcore::pack::annealer::FixbbSimAnnealer
lowtempcore::pack::annealer::SimAnnealerBaseprotectedstatic
maxouteriterationscore::pack::annealer::SimAnnealerBaseprotectedstatic
num_rots_to_pack() const core::pack::annealer::SimAnnealerBaseinlineprotected
num_rots_to_pack(Size setting)core::pack::annealer::SimAnnealerBaseprotected
pass_metropolis(core::PackerEnergy delta_energy) const core::pack::annealer::SimAnnealerBase
pass_metropolis(core::PackerEnergy previous_energy, core::PackerEnergy delta_energy) const core::pack::annealer::SimAnnealerBase
pick_a_rotamer(int cycle)core::pack::annealer::RotamerAssigningAnnealer
pick_a_rotamer_for_node(int node) const core::pack::annealer::RotamerAssigningAnnealer
quench() const core::pack::annealer::SimAnnealerBase
rot_freq()core::pack::annealer::SimAnnealerBaseprotected
rot_freq() const core::pack::annealer::SimAnnealerBaseprotected
rot_to_pack() const core::pack::annealer::RotamerAssigningAnnealerprotected
rotamer_sets() const core::pack::annealer::RotamerAssigningAnnealerprotected
RotamerAssigningAnnealer(int num_of_rot_to_pack, ObjexxFCL::FArray1D_int &bestrotamer_at_seqpos, core::PackerEnergy &bestenergy, bool start_with_current, FixbbRotamerSetsCOP p_rotamer_set, ObjexxFCL::FArray1_int &current_rot_index, bool calc_rot_freq, ObjexxFCL::FArray1D< core::PackerEnergy > &rot_freq)core::pack::annealer::RotamerAssigningAnnealer
RotamerAssigningAnnealer(utility::vector0< int > &rot_to_pack, int num_of_rot_to_pack, ObjexxFCL::FArray1D_int &bestrotamer_at_seqpos, core::PackerEnergy &bestenergy, bool start_with_current, FixbbRotamerSetsCOP p_rotamer_set, ObjexxFCL::FArray1_int &current_rot_index, bool calc_rot_freq, ObjexxFCL::FArray1D< core::PackerEnergy > &rot_freq)core::pack::annealer::RotamerAssigningAnnealer
RotamerSetsBaseCOP typedefcore::pack::annealer::SimAnnealerBase
run()core::pack::annealer::FixbbSimAnnealervirtual
scale_inneriterations(core::PackerEnergy const si)core::pack::annealer::SimAnnealerBaseinline
scale_outeriterations(core::PackerEnergy const so)core::pack::annealer::SimAnnealerBaseinline
set_assign_state_to_all_nodes_immediately(bool setting)core::pack::annealer::RotamerAssigningAnnealer
set_disallow_quench(bool const &setting)core::pack::annealer::SimAnnealerBase
set_hightemp(core::PackerEnergy)core::pack::annealer::SimAnnealerBase
set_lowtemp(core::PackerEnergy)core::pack::annealer::SimAnnealerBase
set_not_to_quench()core::pack::annealer::SimAnnealerBase
set_temperature(core::PackerEnergy new_temperature)core::pack::annealer::SimAnnealerBase
set_to_quench()core::pack::annealer::SimAnnealerBase
setup_iterations()core::pack::annealer::SimAnnealerBase
setup_iterations(const int &num_of_state_changes)core::pack::annealer::SimAnnealerBase
setup_temperature(const int &nn)core::pack::annealer::SimAnnealerBase
setup_temperature(const ObjexxFCL::FArray1D< core::PackerEnergy > &loopenergy, int nn)core::pack::annealer::SimAnnealerBase
SimAnnealerBase(int num_rots_to_pack, ObjexxFCL::FArray1D_int &bestrotamer_at_seqpos, core::PackerEnergy &bestenergy, bool start_with_current, ObjexxFCL::FArray1_int &current_rot_index, bool calc_rot_freq, ObjexxFCL::FArray1D< core::PackerEnergy > &rot_freq)core::pack::annealer::SimAnnealerBase
start_with_current() const core::pack::annealer::SimAnnealerBaseprotected
~FixbbSimAnnealer()core::pack::annealer::FixbbSimAnnealervirtual
~RotamerAssigningAnnealer()core::pack::annealer::RotamerAssigningAnnealervirtual
~SimAnnealerBase()core::pack::annealer::SimAnnealerBasevirtual