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core::pack::interaction_graph::FASTERNode Member List

This is the complete list of members for core::pack::interaction_graph::FASTERNode, including all inherited members.

acknowledge_neighbors_partial_state_assignment(int which_neighbor, int neighbors_new_state)core::pack::interaction_graph::FASTERNode
acknowledge_neighbors_perturbed_state(int which_neighbor, int const neighbors_perturbed_state)core::pack::interaction_graph::FASTERNode
acknowledge_neighbors_state_substitution(int edge_to_altered_neighbor, core::PackerEnergy new_edge_energy, int other_node_new_state)core::pack::interaction_graph::FASTERNodeinline
add_edge(EdgeBase *edge_ptr)core::pack::interaction_graph::NodeBase
add_to_one_body_energies(ObjexxFCL::FArray1< core::PackerEnergy > &energies)core::pack::interaction_graph::FASTERNodevirtual
add_to_one_body_energy(int state, core::PackerEnergy energy)core::pack::interaction_graph::FASTERNodevirtual
alternate_state_core::pack::interaction_graph::FASTERNodeprivate
alternate_state_is_being_considered_core::pack::interaction_graph::FASTERNodeprivate
alternate_state_one_body_energy_core::pack::interaction_graph::FASTERNodeprivate
alternate_state_total_energy_core::pack::interaction_graph::FASTERNodeprivate
alternate_state_two_body_energies_core::pack::interaction_graph::FASTERNodeprivate
assign_state(int new_state)core::pack::interaction_graph::FASTERNode
assign_zero_state()core::pack::interaction_graph::FASTERNodevirtual
commit_considered_substitution()core::pack::interaction_graph::FASTERNode
complete_partial_state_assignment()core::pack::interaction_graph::FASTERNode
count_dynamic_memory() const core::pack::interaction_graph::FASTERNodevirtual
count_static_memory() const core::pack::interaction_graph::FASTERNodevirtual
curr_state_one_body_energy_core::pack::interaction_graph::FASTERNodeprivate
curr_state_total_energy_core::pack::interaction_graph::FASTERNodeprivate
curr_state_two_body_energies_core::pack::interaction_graph::FASTERNodeprivate
current_state_core::pack::interaction_graph::FASTERNodeprivate
depth_first_connected_component_counting()core::pack::interaction_graph::NodeBase
drop_all_edges()core::pack::interaction_graph::NodeBase
drop_edge(std::list< EdgeBase * >::iterator edge_iterator)core::pack::interaction_graph::NodeBase
edge_list_begin()core::pack::interaction_graph::NodeBase
edge_list_end()core::pack::interaction_graph::NodeBase
edge_matrix_ptrs_core::pack::interaction_graph::FASTERNodeprivate
FASTERNode(InteractionGraphBase *owner, int node_id, int num_states)core::pack::interaction_graph::FASTERNode
FASTERNode()core::pack::interaction_graph::FASTERNodeprivate
FASTERNode(FASTERNode const &)core::pack::interaction_graph::FASTERNodeprivate
find_edge(int other_node_index) const core::pack::interaction_graph::NodeBase
FixedBBNode(InteractionGraphBase *owner, int node_id, int num_states)core::pack::interaction_graph::FixedBBNodeinline
get_adjacent_faster_node(int index) const core::pack::interaction_graph::FASTERNodeinlineprotected
get_adjacent_faster_node(int index)core::pack::interaction_graph::FASTERNodeinlineprotected
get_adjacent_node(int index) const core::pack::interaction_graph::NodeBaseinline
get_adjacent_node(int index)core::pack::interaction_graph::NodeBaseinline
get_current_state() const core::pack::interaction_graph::FASTERNode
get_deltaE_for_relaxed_state_following_perturbation()core::pack::interaction_graph::FASTERNode
get_edge_vector_up_to_date() const core::pack::interaction_graph::NodeBaseinlineprotected
get_fasterig_owner() const core::pack::interaction_graph::FASTERNodeinlineprotected
get_fasterig_owner()core::pack::interaction_graph::FASTERNodeinlineprotected
get_incident_edge(int index) const core::pack::interaction_graph::NodeBaseinline
get_incident_edge(int index)core::pack::interaction_graph::NodeBaseinline
get_incident_faster_edge(int index) const core::pack::interaction_graph::FASTERNodeinlineprotected
get_incident_faster_edge(int index)core::pack::interaction_graph::FASTERNodeinlineprotected
get_index_of_adjacent_node(int index) const core::pack::interaction_graph::NodeBaseinline
get_node_index() const core::pack::interaction_graph::NodeBaseinline
get_num_edges_to_larger_indexed_nodes() const core::pack::interaction_graph::NodeBaseinline
get_num_edges_to_smaller_indexed_nodes() const core::pack::interaction_graph::NodeBaseinline
get_num_incident_edges() const core::pack::interaction_graph::NodeBaseinline
get_num_states() const core::pack::interaction_graph::NodeBase
get_one_body_energy(int state)core::pack::interaction_graph::FASTERNode
get_one_body_energy_current_state() const core::pack::interaction_graph::FASTERNode
get_one_body_energy_for_relaxed_state() const core::pack::interaction_graph::FASTERNode
get_owner() const core::pack::interaction_graph::NodeBaseinlineprotected
get_owner()core::pack::interaction_graph::NodeBaseinlineprotected
get_random_neighbor()core::pack::interaction_graph::FASTERNode
get_relaxed_state() const core::pack::interaction_graph::FASTERNode
get_total_energy_in_curr_state_assignment_for_all_states()core::pack::interaction_graph::FASTERNode
have_contributed_deltaE_following_perturbation_core::pack::interaction_graph::FASTERNodeprivate
have_prepared_once_for_FASTER_core::pack::interaction_graph::FASTERNodeprivate
have_relaxed_since_neighbors_perturbation_core::pack::interaction_graph::FASTERNodeprivate
in_FASTER_mode_core::pack::interaction_graph::FASTERNodeprivate
neighbor_relaxed_in_sBR_core::pack::interaction_graph::FASTERNodeprivate
neighbors_curr_state_core::pack::interaction_graph::FASTERNodeprivate
NodeBase(InteractionGraphBase *, int node_id, int num_states)core::pack::interaction_graph::NodeBase
one_body_energies_core::pack::interaction_graph::FASTERNodeprivate
operator=(FASTERNode const &)core::pack::interaction_graph::FASTERNodeprivate
parent typedefcore::pack::interaction_graph::FASTERNode
partial_assign_relaxed_state(Real probability)core::pack::interaction_graph::FASTERNode
partial_assign_state(int state)core::pack::interaction_graph::FASTERNode
partial_assign_state_with_lowest_one_body_energy()core::pack::interaction_graph::FASTERNode
perturbed_core::pack::interaction_graph::FASTERNodeprivate
perturbed_two_body_energies_core::pack::interaction_graph::FASTERNodeprivate
PrecomputedPairEnergiesNode(InteractionGraphBase *owner, int node_id, int num_states)core::pack::interaction_graph::PrecomputedPairEnergiesNodeinline
prep_for_neighbors_perturbation()core::pack::interaction_graph::FASTERNode
prepare_for_FASTER()core::pack::interaction_graph::FASTERNode
prepare_for_perturbation()core::pack::interaction_graph::FASTERNode
prepare_for_simulated_annealing()core::pack::interaction_graph::FASTERNodevirtual
print() const core::pack::interaction_graph::FASTERNodevirtual
print_internal_energies() const core::pack::interaction_graph::FASTERNode
project_deltaE_for_substitution(int alternate_state, core::PackerEnergy &prev_node_energy)core::pack::interaction_graph::FASTERNodeinline
relax()core::pack::interaction_graph::FASTERNode
relax_after_neighbors_perturbation()core::pack::interaction_graph::FASTERNode
relax_neighbors()core::pack::interaction_graph::FASTERNode
relaxed_state_core::pack::interaction_graph::FASTERNodeprivate
reset_relaxed()core::pack::interaction_graph::FASTERNode
reset_relaxed_for_neighbors()core::pack::interaction_graph::FASTERNode
set_no_longer_perturbed()core::pack::interaction_graph::FASTERNode
set_perturbed_state(int perturbed_state)core::pack::interaction_graph::FASTERNode
state_energies_in_current_context_core::pack::interaction_graph::FASTERNodeprivate
state_energies_in_current_state_assignment_core::pack::interaction_graph::FASTERNodeprivate
state_unassigned() const core::pack::interaction_graph::FASTERNodeinlinevirtual
tell_neighbors_to_prep_for_relaxation()core::pack::interaction_graph::FASTERNode
update_edge_vector()core::pack::interaction_graph::NodeBaseprotected
update_internal_energy_sums()core::pack::interaction_graph::FASTERNode
update_internal_vectors()core::pack::interaction_graph::FASTERNodeprotected
update_one_body_energies(ObjexxFCL::FArray1< core::PackerEnergy > &energies)core::pack::interaction_graph::FASTERNodevirtual
update_one_body_energy(int state, core::PackerEnergy energy)core::pack::interaction_graph::FASTERNodevirtual
zero_one_body_energies()core::pack::interaction_graph::FASTERNodevirtual
~FASTERNode()core::pack::interaction_graph::FASTERNodevirtual
~FixedBBNode()core::pack::interaction_graph::FixedBBNodeinlinevirtual
~NodeBase()core::pack::interaction_graph::NodeBasevirtual
~PrecomputedPairEnergiesNode()core::pack::interaction_graph::PrecomputedPairEnergiesNodeinlinevirtual