#include <SheetTopologyFilter.hh>

Inheritance diagram for protocols::fldsgn::filters::SheetTopologyFilter:

Collaboration diagram for protocols::fldsgn::filters::SheetTopologyFilter:

Public Types
typedef protocols::filters::Filter	Super

typedef protocols::filters::Filter	Filter

typedef std::string	String

typedef protocols::filters::FilterOP	FilterOP

typedef core::pose::Pose	Pose

typedef protocols::fldsgn::topology::StrandPairingSet	StrandPairingSet

typedef protocols::fldsgn::topology::StrandPairingSetOP	StrandPairingSetOP

typedef protocols::fldsgn::topology::SS_Info2	SS_Info2

typedef protocols::fldsgn::topology::SS_Info2_OP	SS_Info2_OP

typedef utility::tag::TagPtr	TagPtr

typedef protocols::filters::Filters_map	Filters_map

typedef protocols::moves::DataMap	DataMap

typedef protocols::moves::Movers_map	Movers_map

Public Member Functions
	SheetTopologyFilter ()

	SheetTopologyFilter (StrandPairingSetOP const &sps)

	SheetTopologyFilter (String const &sheet_topology)

	SheetTopologyFilter (SheetTopologyFilter const &rval)

virtual	~SheetTopologyFilter ()

virtual FilterOP	clone () const

virtual FilterOP	fresh_instance () const

void	filtered_sheet_topology (StrandPairingSetOP const &sps)

void	filtered_sheet_topology (String const &sheet_topology)

virtual std::string	name () const

virtual void	parse_my_tag (TagPtr const tag, DataMap &, Filters_map const &, Movers_map const &, Pose const &)
	parse xml More...

virtual bool	apply (Pose const &pose) const
	Returns true if the given pose passes the filter, false otherwise. More...

Public Member Functions inherited from protocols::filters::Filter
	Filter ()

	Filter (std::string const &)

	Filter (Filter const &)

virtual	~Filter ()

virtual void	report (std::ostream &, core::pose::Pose const &) const

virtual core::Real	report_sm (core::pose::Pose const &) const
	used to report filter internals through a score or silent file More...

virtual std::string	get_type () const

std::string	get_user_defined_name () const

void	set_user_defined_name (std::string const &name)

virtual void	clear ()
	used to clear internal variables if needed. Using fresh_instance is preferred since it's a pure virtual More...

virtual void	apply (core::io::serialization::PipeMap &pmap)

virtual void	score (core::io::serialization::PipeMap &pmap)

virtual core::Real	score (core::pose::Pose &pose)

virtual void	parse_def (utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks)

Private Attributes
String	filtered_sheet_topology_

bool	secstruct_input_

SS_Info2_OP	ssinfo_

Additional Inherited Members
Protected Attributes inherited from protocols::filters::Filter
std::string	scorename_

Member Typedef Documentation

typedef protocols::moves::DataMap protocols::fldsgn::filters::SheetTopologyFilter::DataMap

typedef protocols::filters::Filter protocols::fldsgn::filters::SheetTopologyFilter::Filter

typedef protocols::filters::FilterOP protocols::fldsgn::filters::SheetTopologyFilter::FilterOP

typedef protocols::filters::Filters_map protocols::fldsgn::filters::SheetTopologyFilter::Filters_map

typedef protocols::moves::Movers_map protocols::fldsgn::filters::SheetTopologyFilter::Movers_map

typedef core::pose::Pose protocols::fldsgn::filters::SheetTopologyFilter::Pose

typedef protocols::fldsgn::topology::SS_Info2 protocols::fldsgn::filters::SheetTopologyFilter::SS_Info2

typedef protocols::fldsgn::topology::SS_Info2_OP protocols::fldsgn::filters::SheetTopologyFilter::SS_Info2_OP

typedef protocols::fldsgn::topology::StrandPairingSet protocols::fldsgn::filters::SheetTopologyFilter::StrandPairingSet

typedef protocols::fldsgn::topology::StrandPairingSetOP protocols::fldsgn::filters::SheetTopologyFilter::StrandPairingSetOP

typedef std::string protocols::fldsgn::filters::SheetTopologyFilter::String

typedef protocols::filters::Filter protocols::fldsgn::filters::SheetTopologyFilter::Super

typedef utility::tag::TagPtr protocols::fldsgn::filters::SheetTopologyFilter::TagPtr

Constructor & Destructor Documentation

protocols::fldsgn::filters::SheetTopologyFilter::SheetTopologyFilter ( )

Referenced by clone(), and fresh_instance().

protocols::fldsgn::filters::SheetTopologyFilter::SheetTopologyFilter ( StrandPairingSetOP const & sps)

References filtered_sheet_topology_.

protocols::fldsgn::filters::SheetTopologyFilter::SheetTopologyFilter ( String const & sheet_topology)

protocols::fldsgn::filters::SheetTopologyFilter::SheetTopologyFilter ( SheetTopologyFilter const & rval)

virtual protocols::fldsgn::filters::SheetTopologyFilter::~SheetTopologyFilter ( )

inlinevirtual

Member Function Documentation

bool protocols::fldsgn::filters::SheetTopologyFilter::apply ( Pose const & pose) const

virtual

Returns true if the given pose passes the filter, false otherwise.

Implements protocols::filters::Filter.

References protocols::fldsgn::topology::calc_strand_pairing_set(), filtered_sheet_topology_, protocols::fldsgn::topology::StrandPairingSet::name(), protocols::fldsgn::topology::NO_STRANDS, secstruct_input_, protocols::fldsgn::topology::StrandPairingSet::size(), ssinfo_, protocols::fldsgn::topology::StrandPairingSet::strand_pairing(), and tr().

virtual FilterOP protocols::fldsgn::filters::SheetTopologyFilter::clone ( ) const

inlinevirtual

Implements protocols::filters::Filter.

References SheetTopologyFilter().

void protocols::fldsgn::filters::SheetTopologyFilter::filtered_sheet_topology ( StrandPairingSetOP const & sps)

References filtered_sheet_topology_.

void protocols::fldsgn::filters::SheetTopologyFilter::filtered_sheet_topology ( String const & sheet_topology)

References filtered_sheet_topology_.

virtual FilterOP protocols::fldsgn::filters::SheetTopologyFilter::fresh_instance ( ) const

inlinevirtual

Implements protocols::filters::Filter.

References SheetTopologyFilter().

virtual std::string protocols::fldsgn::filters::SheetTopologyFilter::name ( ) const

inlinevirtual

Reimplemented from protocols::filters::Filter.

void protocols::fldsgn::filters::SheetTopologyFilter::parse_my_tag	(	TagPtr const	tag,
		DataMap &	,
		Filters_map const &	,
		Movers_map const &	,
		Pose const &
	)

virtual

parse xml

Reimplemented from protocols::filters::Filter.

References filtered_sheet_topology_, protocols::jd2::parser::BluePrint::secstruct(), secstruct_input_, ssinfo_, protocols::jd2::parser::BluePrint::strand_pairings(), and tr().

Member Data Documentation

String protocols::fldsgn::filters::SheetTopologyFilter::filtered_sheet_topology_

private

Referenced by apply(), filtered_sheet_topology(), parse_my_tag(), and SheetTopologyFilter().

bool protocols::fldsgn::filters::SheetTopologyFilter::secstruct_input_

private

Referenced by apply(), and parse_my_tag().

SS_Info2_OP protocols::fldsgn::filters::SheetTopologyFilter::ssinfo_

private

Referenced by apply(), and parse_my_tag().

The documentation for this class was generated from the following files:

src/protocols/fldsgn/filters/SheetTopologyFilter.hh
src/protocols/fldsgn/filters/SheetTopologyFilter.cc

Public Types

Public Member Functions

Private Attributes

Additional Inherited Members

Member Typedef Documentation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation