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sym_atom_tree_minimize.cc File Reference
#include <core/optimization/symmetry/sym_atom_tree_minimize.hh>
#include <core/optimization/types.hh>
#include <core/optimization/Multifunc.hh>
#include <core/optimization/symmetry/SymMinimizerMap.hh>
#include <core/optimization/atom_tree_minimize.hh>
#include <core/pose/symmetry/util.hh>
#include <core/conformation/symmetry/util.hh>
#include <core/conformation/symmetry/SymmetryInfo.hh>
#include <core/pose/Pose.hh>
#include <core/scoring/EnergyMap.hh>
#include <core/scoring/MinimizationGraph.hh>
#include <core/scoring/ScoreType.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/symmetry/SymmetricEnergies.hh>
#include <ObjexxFCL/FArray2D.hh>
#include <ObjexxFCL/format.hh>
#include <numeric/constants.hh>
#include <numeric/conversions.hh>
#include <basic/Tracer.hh>
#include <core/conformation/symmetry/SymmetricConformation.hh>
#include <core/optimization/MinimizerMap.hh>
#include <utility/vector1.hh>
#include <core/kinematics/AtomTree.hh>
#include <core/kinematics/FoldTree.hh>

Classes

class  core::optimization::symmetry::MinDebug
 

Namespaces

 core
 A class for defining atom parameters, known as atom_types.
 
 core::optimization
 
 core::optimization::symmetry
 

Constant Groups

 core
 A class for defining atom parameters, known as atom_types.
 
 core::optimization
 
 core::optimization::symmetry
 

Typedefs

typedef id::DOF_ID core::optimization::symmetry::DOF_ID
 

Functions

static basic::Tracer core::optimization::symmetry::TR ("core.optimization.symmetry")
 
void core::optimization::symmetry::atom_tree_dfunc (pose::Pose &pose, SymMinimizerMap &symm_min_map, scoring::ScoreFunction const &scorefxn, Multivec const &vars, Multivec &dE_dvars)
 
void core::optimization::symmetry::atom_tree_get_atompairE_deriv (pose::Pose &pose, SymMinimizerMap &symm_min_map, scoring::ScoreFunction const &scorefxn)
 
void core::optimization::symmetry::numerical_derivative_check (SymMinimizerMap const &min_map, Multifunc const &func, Multivec const &start_vars, Multivec const &dE_dvars, bool const verbose)