accept_hists_ | protocols::backrub::BackrubSidechainMover | private |
apply(core::pose::Pose &pose) | protocols::backrub::BackrubSidechainMover | virtual |
protocols::canonical_sampling::ThermodynamicMover::apply(core::io::serialization::PipeMap &pmap) | protocols::moves::Mover | virtual |
backrub_mover_ | protocols::backrub::BackrubSidechainMover | private |
BackrubSidechainMover() | protocols::backrub::BackrubSidechainMover | |
BackrubSidechainMover(BackrubSidechainMover const &mover) | protocols::backrub::BackrubSidechainMover | |
clear_info() | protocols::moves::Mover | inlinevirtual |
clone() const | protocols::backrub::BackrubSidechainMover | virtual |
create() | protocols::moves::Mover | virtual |
dof_id_ranges(core::pose::Pose &pose) | protocols::canonical_sampling::ThermodynamicMover | virtual |
Filters_map typedef | protocols::moves::Mover | |
finalize_simulation(core::pose::Pose &pose, protocols::canonical_sampling::MetropolisHastingsMover const &metropolis_hastings_mover) | protocols::backrub::BackrubSidechainMover | virtual |
fresh_instance() const | protocols::backrub::BackrubSidechainMover | virtual |
get_additional_output() | protocols::moves::Mover | virtual |
get_current_job() const | protocols::moves::Mover | |
get_current_tag() const | protocols::moves::Mover | inline |
get_input_pose() const | protocols::moves::Mover | |
get_last_move_status() const | protocols::moves::Mover | |
get_name() const | protocols::backrub::BackrubSidechainMover | virtual |
get_native_pose() const | protocols::moves::Mover | |
get_type() const | protocols::moves::Mover | inline |
info() | protocols::moves::Mover | inlinevirtual |
info() const | protocols::moves::Mover | inlinevirtual |
initialize_simulation(core::pose::Pose &pose, protocols::canonical_sampling::MetropolisHastingsMover const &metropolis_hastings_mover, core::Size cycle) | protocols::backrub::BackrubSidechainMover | virtual |
is_multi_trial() | protocols::canonical_sampling::ThermodynamicMover | virtual |
last_chi1_post_ | protocols::backrub::BackrubSidechainMover | private |
last_chi1_pre_ | protocols::backrub::BackrubSidechainMover | private |
last_inner_score_temperature_delta() | protocols::canonical_sampling::ThermodynamicMover | virtual |
last_proposal_density_ratio() | protocols::canonical_sampling::ThermodynamicMover | virtual |
last_valid_segment_index_ | protocols::backrub::BackrubSidechainMover | private |
metropolis_hastings_mover() | protocols::canonical_sampling::ThermodynamicMover | virtual |
Mover() | protocols::moves::Mover | |
Mover(std::string const &type_name) | protocols::moves::Mover | |
Mover(Mover const &other) | protocols::moves::Mover | |
name() | protocols::moves::Mover | inlinestatic |
observe_after_metropolis(protocols::canonical_sampling::MetropolisHastingsMover const &metropolis_hastings_mover) | protocols::backrub::BackrubSidechainMover | virtual |
operator=(Mover const &other) | protocols::moves::Mover | |
output_statistics(std::ostream &out) | protocols::backrub::BackrubSidechainMover | |
parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks, MoverCacheSP cache) | protocols::moves::Mover | virtual |
parse_my_tag(utility::tag::TagPtr const tag, protocols::moves::DataMap &data, protocols::filters::Filters_map const &filters, protocols::moves::Movers_map const &movers, core::pose::Pose const &pose) | protocols::backrub::BackrubSidechainMover | virtual |
parse_state(SerializableState const &state) | protocols::moves::Mover | virtual |
pivot_residues() const | protocols::backrub::BackrubSidechainMover | |
Pose typedef | protocols::moves::Mover | |
PoseCOP typedef | protocols::moves::Mover | |
preserve_detailed_balance() const | protocols::backrub::BackrubSidechainMover | virtual |
prob_random_pert_current() const | protocols::backrub::BackrubSidechainMover | |
prob_uniform() const | protocols::backrub::BackrubSidechainMover | |
prob_withinrot() const | protocols::backrub::BackrubSidechainMover | |
proposal_hists_ | protocols::backrub::BackrubSidechainMover | private |
record_histograms(bool accept) | protocols::backrub::BackrubSidechainMover | private |
record_statistics() const | protocols::backrub::BackrubSidechainMover | |
record_statistics_ | protocols::backrub::BackrubSidechainMover | private |
register_options() | protocols::moves::Mover | inlinestatic |
reinitialize_for_each_job() const | protocols::moves::Mover | virtual |
reinitialize_for_new_input() const | protocols::moves::Mover | virtual |
require_mm_bend() const | protocols::backrub::BackrubSidechainMover | |
reset_statistics() | protocols::backrub::BackrubSidechainMover | |
reset_status() | protocols::moves::Mover | |
save_state(SerializableState &state) | protocols::moves::Mover | virtual |
set_current_job(protocols::jobdist::BasicJobCOP job) | protocols::moves::Mover | |
set_current_tag(std::string const &new_tag) | protocols::moves::Mover | inline |
set_input_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
set_last_move_status(MoverStatus status) | protocols::moves::Mover | protected |
set_metropolis_hastings_mover(protocols::canonical_sampling::MetropolisHastingsMoverAP metropolis_hastings_mover) | protocols::canonical_sampling::ThermodynamicMover | virtual |
set_native_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
set_pivot_residues(utility::vector1< core::Size > const &pivot_residues) | protocols::backrub::BackrubSidechainMover | |
set_preserve_detailed_balance(bool preserve_detailed_balance) | protocols::backrub::BackrubSidechainMover | virtual |
set_prob_random_pert_current(core::Real prob_pert) | protocols::backrub::BackrubSidechainMover | |
set_prob_uniform(core::Real prob_uniform) | protocols::backrub::BackrubSidechainMover | |
set_prob_withinrot(core::Real prob_withinrot) | protocols::backrub::BackrubSidechainMover | |
set_record_statistics(bool record_statistics) | protocols::backrub::BackrubSidechainMover | |
set_require_mm_bend(bool require_mm_bend) | protocols::backrub::BackrubSidechainMover | |
set_statistics_filename(std::string const &statistics_filename) | protocols::backrub::BackrubSidechainMover | |
set_task_factory(core::pack::task::TaskFactoryOP task_factory) | protocols::backrub::BackrubSidechainMover | |
setup_histograms() | protocols::backrub::BackrubSidechainMover | private |
sidechain_mover_ | protocols::backrub::BackrubSidechainMover | private |
statistics_filename() const | protocols::backrub::BackrubSidechainMover | |
statistics_filename_ | protocols::backrub::BackrubSidechainMover | private |
Strings typedef | protocols::moves::Mover | |
TagPtr typedef | protocols::moves::Mover | |
task_factory() const | protocols::backrub::BackrubSidechainMover | |
test_move(Pose &pose) | protocols::moves::Mover | inlinevirtual |
ThermodynamicMover() | protocols::canonical_sampling::ThermodynamicMover | |
torsion_id_ranges(core::pose::Pose &pose) | protocols::backrub::BackrubSidechainMover | virtual |
type() const | protocols::moves::Mover | inline |
type(const std::string &type_in) | protocols::moves::Mover | inline |
update_segments(core::pose::Pose const &pose) | protocols::backrub::BackrubSidechainMover | |
update_type() | protocols::backrub::BackrubSidechainMover | private |
valid_segments_ | protocols::backrub::BackrubSidechainMover | private |
~BackrubSidechainMover() | protocols::backrub::BackrubSidechainMover | virtual |
~Mover() | protocols::moves::Mover | virtual |
~ThermodynamicMover() | protocols::canonical_sampling::ThermodynamicMover | virtual |