protocols::toolbox::task_operations::PreventChainFromRepackingOperation Class Reference

#include <PreventChainFromRepackingOperation.hh>

Inheritance diagram for protocols::toolbox::task_operations::PreventChainFromRepackingOperation:

Collaboration diagram for protocols::toolbox::task_operations::PreventChainFromRepackingOperation:

Public Types
typedef RestrictOperationsBase	parent
Public Types inherited from protocols::toolbox::task_operations::RestrictOperationsBase
typedef core::pack::task::operation::TaskOperation	TaskOperation
typedef core::pack::task::operation::TaskOperationOP	TaskOperationOP
typedef TaskOperation	parent
Public Types inherited from core::pack::task::operation::TaskOperation
typedef utility::tag::TagPtr	TagPtr
typedef pose::Pose	Pose

Public Member Functions
	PreventChainFromRepackingOperation ()
	PreventChainFromRepackingOperation (core::Size const chain)
void	chain (core::Size const chain)
core::Size	chain () const
virtual	~PreventChainFromRepackingOperation ()
virtual TaskOperationOP	clone () const
	Create another task operation of the type matching the most-derived version of the class. More...
virtual void	apply (core::pose::Pose const &, core::pack::task::PackerTask &) const
	Change a packer task in some way. The input pose is the one to which the input task will be later applied. More...
virtual void	parse_tag (TagPtr)
	Used to parse an xml-like tag to load parameters and properties. More...
Public Member Functions inherited from protocols::toolbox::task_operations::RestrictOperationsBase
	RestrictOperationsBase ()
virtual	~RestrictOperationsBase ()
Public Member Functions inherited from core::pack::task::operation::TaskOperation
virtual	~TaskOperation ()
virtual void	parse_def (utility::lua::LuaObject const &def)

Private Attributes
core::Size	chain_

Additional Inherited Members
Protected Member Functions inherited from protocols::toolbox::task_operations::RestrictOperationsBase
void	run_calculator (core::pose::Pose const &pose, std::string const &calculator, std::string const &calculation, utility::vector1_bool &residues) const
	this is the only real function - it takes a calculator name and calculation, and a PackerTask-compatible vector, and flips booleans in the vector according to the calculator More...

Detailed Description

this class is a TaskOperation to prevent repacking of residues not near an interface.

Member Typedef Documentation

typedef RestrictOperationsBase protocols::toolbox::task_operations::PreventChainFromRepackingOperation::parent

Constructor & Destructor Documentation

protocols::toolbox::task_operations::PreventChainFromRepackingOperation::PreventChainFromRepackingOperation

(

)

Referenced by clone().

protocols::toolbox::task_operations::PreventChainFromRepackingOperation::PreventChainFromRepackingOperation

(

core::Size const

chain)

protocols::toolbox::task_operations::PreventChainFromRepackingOperation::~PreventChainFromRepackingOperation ( )

virtual

Member Function Documentation

void protocols::toolbox::task_operations::PreventChainFromRepackingOperation::apply ( core::pose::Pose const &  , core::pack::task::PackerTask &    ) const

virtual

Change a packer task in some way. The input pose is the one to which the input task will be later applied.

Implements protocols::toolbox::task_operations::RestrictOperationsBase.

References chain_, core::conformation::Conformation::chain_begin(), core::conformation::Conformation::chain_end(), core::pose::Pose::conformation(), and core::pack::task::operation::PreventRepacking::include_residue().

Referenced by protocols::toolbox::task_operations::ProteinInterfaceDesignOperation::apply().

void protocols::toolbox::task_operations::PreventChainFromRepackingOperation::chain

(

core::Size const

chain)

References chain(), and chain_.

Referenced by protocols::toolbox::task_operations::ProteinInterfaceDesignOperation::apply().

core::Size protocols::toolbox::task_operations::PreventChainFromRepackingOperation::chain

(

)

const

References chain_.

Referenced by chain(), and parse_tag().

core::pack::task::operation::TaskOperationOP protocols::toolbox::task_operations::PreventChainFromRepackingOperation::clone ( ) const

virtual

Create another task operation of the type matching the most-derived version of the class.

Implements protocols::toolbox::task_operations::RestrictOperationsBase.

References PreventChainFromRepackingOperation().

void protocols::toolbox::task_operations::PreventChainFromRepackingOperation::parse_tag ( TagPtr  tag)

virtual

Used to parse an xml-like tag to load parameters and properties.

Reimplemented from core::pack::task::operation::TaskOperation.

References chain().

Member Data Documentation

core::Size protocols::toolbox::task_operations::PreventChainFromRepackingOperation::chain_

private

Referenced by apply(), and chain().

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The documentation for this class was generated from the following files:

• src/protocols/toolbox/task_operations/PreventChainFromRepackingOperation.hh
• src/protocols/toolbox/task_operations/PreventChainFromRepackingOperation.cc