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Public Member Functions | Private Attributes | List of all members
protocols::simple_filters::SidechainRmsdFilter Class Reference

#include <SidechainRmsdFilter.hh>

Inheritance diagram for protocols::simple_filters::SidechainRmsdFilter:
Inheritance graph
Collaboration diagram for protocols::simple_filters::SidechainRmsdFilter:
Collaboration graph

Public Member Functions

 SidechainRmsdFilter ()
 SidechainRmsdFilter (core::Size const res1, core::Size const res2, core::Real const rmsd_threshold)
bool apply (core::pose::Pose const &pose) const
 Returns true if the given pose passes the filter, false otherwise. More...
void report (std::ostream &out, core::pose::Pose const &pose) const
core::Real report_sm (core::pose::Pose const &pose) const
 used to report filter internals through a score or silent file More...
core::Real compute (core::pose::Pose const &pose) const
filters::FilterOP clone () const
filters::FilterOP fresh_instance () const
virtual ~SidechainRmsdFilter ()
void parse_my_tag (utility::tag::TagPtr const tag, protocols::moves::DataMap &, filters::Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &)
- Public Member Functions inherited from protocols::filters::Filter
 Filter ()
 Filter (std::string const &)
 Filter (Filter const &)
virtual ~Filter ()
virtual std::string get_type () const
std::string get_user_defined_name () const
void set_user_defined_name (std::string const &name)
virtual void clear ()
 used to clear internal variables if needed. Using fresh_instance is preferred since it's a pure virtual More...
virtual void apply (core::io::serialization::PipeMap &pmap)
virtual void score (core::io::serialization::PipeMap &pmap)
virtual core::Real score (core::pose::Pose &pose)
virtual void parse_def (utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks)
virtual std::string name () const

Private Attributes

core::Size res1_
core::Size res2_
core::Real rmsd_threshold_
core::pose::PoseOP reference_pose_
bool include_backbone_

Additional Inherited Members

- Protected Attributes inherited from protocols::filters::Filter
std::string scorename_

Constructor & Destructor Documentation

protocols::simple_filters::SidechainRmsdFilter::SidechainRmsdFilter ( )

Referenced by clone(), and fresh_instance().

protocols::simple_filters::SidechainRmsdFilter::SidechainRmsdFilter ( core::Size const  res1,
core::Size const  res2,
core::Real const  rmsd_threshold 
protocols::simple_filters::SidechainRmsdFilter::~SidechainRmsdFilter ( )

Member Function Documentation

bool protocols::simple_filters::SidechainRmsdFilter::apply ( core::pose::Pose const &  pose) const

Returns true if the given pose passes the filter, false otherwise.

Implements protocols::filters::Filter.

References compute(), res1_, rmsd_threshold_, and protocols::simple_filters::sidechain_rmsd_filter_tracer().

filters::FilterOP protocols::simple_filters::SidechainRmsdFilter::clone ( ) const
core::Real protocols::simple_filters::SidechainRmsdFilter::compute ( core::pose::Pose const &  pose) const
filters::FilterOP protocols::simple_filters::SidechainRmsdFilter::fresh_instance ( ) const
void protocols::simple_filters::SidechainRmsdFilter::parse_my_tag ( utility::tag::TagPtr const  tag,
protocols::moves::DataMap data_map,
filters::Filters_map const &  ,
protocols::moves::Movers_map const &  ,
core::pose::Pose const &  pose 
void protocols::simple_filters::SidechainRmsdFilter::report ( std::ostream &  out,
core::pose::Pose const &  pose 
) const

Reimplemented from protocols::filters::Filter.

References compute(), and res1_.

core::Real protocols::simple_filters::SidechainRmsdFilter::report_sm ( core::pose::Pose const &  ) const

used to report filter internals through a score or silent file

Reimplemented from protocols::filters::Filter.

References compute().

Member Data Documentation

bool protocols::simple_filters::SidechainRmsdFilter::include_backbone_

Referenced by compute(), and parse_my_tag().

core::pose::PoseOP protocols::simple_filters::SidechainRmsdFilter::reference_pose_

Referenced by compute(), and parse_my_tag().

core::Size protocols::simple_filters::SidechainRmsdFilter::res1_

Referenced by apply(), compute(), parse_my_tag(), and report().

core::Size protocols::simple_filters::SidechainRmsdFilter::res2_

Referenced by compute(), and parse_my_tag().

core::Real protocols::simple_filters::SidechainRmsdFilter::rmsd_threshold_

Referenced by apply(), and parse_my_tag().

The documentation for this class was generated from the following files: