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core::pack::task::PIKRNA Class Reference

PIKRNA allows nucleic acid residues specifed in a following string. More...

#include <ResfileReader.hh>

Inheritance diagram for core::pack::task::PIKRNA:
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Public Member Functions

virtual ResfileCommandOP clone () const
 
virtual void initialize_from_tokens (utility::vector1< std::string > const &tokens, Size &which_token, Size resid)
 PIKNA allows nucleic acid residues specifed in a following string uses a string of single letter codes. More...
 
virtual void residue_action (PackerTask &, Size resid) const
 Modify the packer task with the command that was read in. More...
 
- Public Member Functions inherited from core::pack::task::ResfileCommand
virtual ~ResfileCommand ()
 Automatically generated virtual destructor for class deriving directly from ReferenceCount. More...
 

Static Public Member Functions

static std::string name ()
 

Private Attributes

utility::vector1< chemical::AAkeep_rnas_
 

Detailed Description

PIKRNA allows nucleic acid residues specifed in a following string.

Member Function Documentation

virtual ResfileCommandOP core::pack::task::PIKRNA::clone ( ) const
inlinevirtual
void core::pack::task::PIKRNA::initialize_from_tokens ( utility::vector1< std::string > const &  tokens,
Size which_token,
Size  resid 
)
virtual

PIKNA allows nucleic acid residues specifed in a following string uses a string of single letter codes.

Implements core::pack::task::ResfileCommand.

References core::chemical::aa_unk, core::chemical::na_rad, core::chemical::na_rcy, core::chemical::na_rgu, core::chemical::na_ura, and core::pack::task::TR().

static std::string core::pack::task::PIKRNA::name ( )
inlinestatic
void core::pack::task::PIKRNA::residue_action ( PackerTask ,
Size  resid 
) const
virtual

Modify the packer task with the command that was read in.

Implements core::pack::task::ResfileCommand.

References core::pack::task::ResidueLevelTask::allow_aa(), and core::pack::task::PackerTask::nonconst_residue_task().

Member Data Documentation

utility::vector1< chemical::AA > core::pack::task::PIKRNA::keep_rnas_
private

The documentation for this class was generated from the following files: