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protocols::simple_filters::RotamerBoltzmannWeight Member List

This is the complete list of members for protocols::simple_filters::RotamerBoltzmannWeight, including all inherited members.

apply(core::pose::Pose const &pose) const protocols::simple_filters::RotamerBoltzmannWeightvirtual
protocols::filters::Filter::apply(core::io::serialization::PipeMap &pmap)protocols::filters::Filtervirtual
clear()protocols::filters::Filterinlinevirtual
clone() const protocols::simple_filters::RotamerBoltzmannWeightvirtual
compute(core::pose::Pose const &pose) const protocols::simple_filters::RotamerBoltzmannWeight
compute_Boltzmann_weight(core::pose::Pose const &pose, core::Size const resi) const protocols::simple_filters::RotamerBoltzmannWeight
compute_entropy_reduction() const protocols::simple_filters::RotamerBoltzmannWeight
compute_entropy_reduction(bool const cer)protocols::simple_filters::RotamerBoltzmannWeight
compute_entropy_reduction_protocols::simple_filters::RotamerBoltzmannWeightprivate
compute_modified_ddG(core::pose::Pose const &pose, std::ostream &out) const protocols::simple_filters::RotamerBoltzmannWeight
ddG_threshold() const protocols::simple_filters::RotamerBoltzmannWeight
ddG_threshold(core::Real const ddG)protocols::simple_filters::RotamerBoltzmannWeight
ddG_threshold_protocols::simple_filters::RotamerBoltzmannWeightprivate
ddGs_protocols::simple_filters::RotamerBoltzmannWeightmutableprivate
energy_reduction_factor(core::Real const factor)protocols::simple_filters::RotamerBoltzmannWeight
energy_reduction_factor() const protocols::simple_filters::RotamerBoltzmannWeight
energy_reduction_factor_protocols::simple_filters::RotamerBoltzmannWeightprivate
fast_calc_protocols::simple_filters::RotamerBoltzmannWeightprivate
Filter()protocols::filters::Filter
Filter(std::string const &)protocols::filters::Filter
Filter(Filter const &)protocols::filters::Filter
first_pass_ala_scan(core::pose::Pose const &pose) const protocols::simple_filters::RotamerBoltzmannWeight
fresh_instance() const protocols::simple_filters::RotamerBoltzmannWeightvirtual
get_type() const protocols::filters::Filterinlinevirtual
get_user_defined_name() const protocols::filters::Filterinline
interface_interaction_energy(core::pose::Pose const &pose, core::Size const res) const protocols::simple_filters::RotamerBoltzmannWeight
name() const protocols::filters::Filterinlinevirtual
no_modified_ddG_protocols::simple_filters::RotamerBoltzmannWeightprivate
parent typedefprotocols::simple_filters::RotamerBoltzmannWeightprivate
parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks)protocols::simple_filters::RotamerBoltzmannWeightvirtual
parse_my_tag(utility::tag::TagPtr const tag, protocols::moves::DataMap &, protocols::filters::Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &)protocols::simple_filters::RotamerBoltzmannWeightvirtual
rb_jump(core::Size const jump)protocols::simple_filters::RotamerBoltzmannWeight
rb_jump() const protocols::simple_filters::RotamerBoltzmannWeight
rb_jump_protocols::simple_filters::RotamerBoltzmannWeightprivate
repack(bool const repack)protocols::simple_filters::RotamerBoltzmannWeight
repack() const protocols::simple_filters::RotamerBoltzmannWeight
repack_protocols::simple_filters::RotamerBoltzmannWeightprivate
repacking_radius(core::Real const rad)protocols::simple_filters::RotamerBoltzmannWeight
repacking_radius() const protocols::simple_filters::RotamerBoltzmannWeight
repacking_radius_protocols::simple_filters::RotamerBoltzmannWeightprivate
report(std::ostream &out, core::pose::Pose const &pose) const protocols::simple_filters::RotamerBoltzmannWeightvirtual
report_sm(core::pose::Pose const &pose) const protocols::simple_filters::RotamerBoltzmannWeightvirtual
rotamer_probabilities_protocols::simple_filters::RotamerBoltzmannWeightmutableprivate
RotamerBoltzmannWeight()protocols::simple_filters::RotamerBoltzmannWeight
score(core::io::serialization::PipeMap &pmap)protocols::filters::Filtervirtual
score(core::pose::Pose &pose)protocols::filters::Filtervirtual
scorefxn(core::scoring::ScoreFunctionOP scorefxn)protocols::simple_filters::RotamerBoltzmannWeight
scorefxn() const protocols::simple_filters::RotamerBoltzmannWeight
scorefxn_protocols::simple_filters::RotamerBoltzmannWeightprivate
scorename_protocols::filters::Filterprotected
set_user_defined_name(std::string const &name)protocols::filters::Filterinline
skip_ala_scan() const protocols::simple_filters::RotamerBoltzmannWeight
skip_ala_scan(bool const s)protocols::simple_filters::RotamerBoltzmannWeight
skip_ala_scan_protocols::simple_filters::RotamerBoltzmannWeightprivate
sym_dof_names(std::string const dof_names)protocols::simple_filters::RotamerBoltzmannWeight
sym_dof_names() const protocols::simple_filters::RotamerBoltzmannWeight
sym_dof_names_protocols::simple_filters::RotamerBoltzmannWeightprivate
target_residues_protocols::simple_filters::RotamerBoltzmannWeightprivate
task_factory() const protocols::simple_filters::RotamerBoltzmannWeight
task_factory(core::pack::task::TaskFactoryOP task_factory)protocols::simple_filters::RotamerBoltzmannWeight
task_factory_protocols::simple_filters::RotamerBoltzmannWeightprivate
temperature() const protocols::simple_filters::RotamerBoltzmannWeight
temperature(core::Real const temp)protocols::simple_filters::RotamerBoltzmannWeight
temperature_protocols::simple_filters::RotamerBoltzmannWeightprivate
threshold_probabilities_per_residue_protocols::simple_filters::RotamerBoltzmannWeightprivate
threshold_probability(core::chemical::AA const aa_type, core::Real const probability)protocols::simple_filters::RotamerBoltzmannWeight
threshold_probability(core::chemical::AA const aa_type) const protocols::simple_filters::RotamerBoltzmannWeight
type() const protocols::simple_filters::RotamerBoltzmannWeight
type(std::string const &s)protocols::simple_filters::RotamerBoltzmannWeight
type_protocols::simple_filters::RotamerBoltzmannWeightprivate
unbound() const protocols::simple_filters::RotamerBoltzmannWeight
unbound(bool const u)protocols::simple_filters::RotamerBoltzmannWeight
unbound_protocols::simple_filters::RotamerBoltzmannWeightprivate
write2pdb() const protocols::simple_filters::RotamerBoltzmannWeight
write2pdb(bool const write)protocols::simple_filters::RotamerBoltzmannWeight
write2pdb_protocols::simple_filters::RotamerBoltzmannWeightprivate
write_to_pdb(core::Size const residue, std::string const residue_name, core::Real const boltzmann_weight) const protocols::simple_filters::RotamerBoltzmannWeight
~Filter()protocols::filters::Filtervirtual
~RotamerBoltzmannWeight()protocols::simple_filters::RotamerBoltzmannWeightvirtual