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protocols::abinitio::Templates Member List

This is the complete list of members for protocols::abinitio::Templates, including all inherited members.

_get_scored_list(TemplateList &cst_list, core::Size topN, core::Real wTopol, core::Real wExtern) const protocols::abinitio::Templatesprivate
add_target_constraints(core::scoring::constraints::ConstraintSetOP, core::pose::Pose const &) const protocols::abinitio::Templates
begin() const protocols::abinitio::Templatesinline
const_iterator typedefprotocols::abinitio::Templates
create_jump_def(core::fragment::SecondaryStructureCOP=NULL) const protocols::abinitio::Templates
cull_list_protocols::abinitio::Templatesprivate
end() const protocols::abinitio::Templatesinline
fragpick_list_protocols::abinitio::Templatesprivate
get_cst_list(TemplateList &cst_list, TemplateList &cull_list) const protocols::abinitio::Templatesprivate
get_template(std::string const &ModelID) const protocols::abinitio::Templatesinline
good_protocols::abinitio::Templatesprivate
has_pairings() const protocols::abinitio::Templatesinline
has_template(std::string const &ModelID) const protocols::abinitio::Templatesinline
helixjump_pick_list_protocols::abinitio::Templatesprivate
helixjump_picks() const protocols::abinitio::Templatesinline
is_good() const protocols::abinitio::Templatesinline
native_protocols::abinitio::Templatesprivate
pairings() const protocols::abinitio::Templatesinline
pairings_protocols::abinitio::Templatesprivate
pick_frags(core::fragment::FragSetOP, core::fragment::FragDataOP frag_type, Size min_nr_frags, Size ncopies=1) const protocols::abinitio::Templates
pick_frags(core::fragment::FragSet &, core::fragment::FragDataOP frag_type, Size ncopies=1) const protocols::abinitio::Templates
pick_large_frags(core::fragment::FragSet &frag_set, core::fragment::SingleResidueFragDataOP frag_type, core::Size ncopies=1) const protocols::abinitio::Templates
read_pairings(std::string const &filename, core::scoring::dssp::PairingsList &) const protocols::abinitio::Templates
register_options()protocols::abinitio::Templatesstatic
scored_fragpick_list(TemplateList &frag_pick_list) const protocols::abinitio::Templatesprivate
set_native(core::pose::PoseCOP native)protocols::abinitio::Templates
strand_pairing_stats()protocols::abinitio::Templatesinline
strand_stats_protocols::abinitio::Templatesprivate
target_sequence() const protocols::abinitio::Templatesinline
target_sequence()protocols::abinitio::Templatesinline
target_sequence_protocols::abinitio::Templatesprivate
target_total_residue() const protocols::abinitio::Templatesinline
TemplateList typedefprotocols::abinitio::Templates
TemplateMap typedefprotocols::abinitio::Templates
Templates(std::string const &config_file, core::pose::PoseCOP native=NULL)protocols::abinitio::Templates
templates_protocols::abinitio::Templatesprivate
~Templates()protocols::abinitio::Templatesvirtual