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protocols::scoring Namespace Reference

Namespaces

 methods
 

Classes

class  ImplicitFastClashCheck
 
class  InterchainPotential
 
class  Interface
 
class  InterfaceInfo
 Keep track of the interface information. More...
 
class  ResidualDipolarCouplingRigidSegments
 ResidualDipolarCouplingRigidSegmentss are mainly handled by this class related classed: RDC — a single line in an RDC file - representing a single dipolar coupling ResidualDipolarCouplingRigidSegmentsEnergy – an energy method which triggers computations handled by this class. More...
 

Typedefs

typedef numeric::xyzVector< RealVec
 
typedef numeric::xyzMatrix< RealMat
 
typedef
utility::pointer::owning_ptr
< ImplicitFastClashCheck
ImplicitFastClashCheckOP
 
typedef
utility::pointer::owning_ptr
< ImplicitFastClashCheck const > 
ImplicitFastClashCheckCOP
 
typedef
utility::pointer::access_ptr
< ImplicitFastClashCheck
ImplicitFastClashCheckAP
 
typedef
utility::pointer::access_ptr
< ImplicitFastClashCheck const > 
ImplicitFastClashCheckCAP
 
typedef
utility::pointer::owning_ptr
< Interface
InterfaceOP
 
typedef
utility::pointer::owning_ptr
< Interface const > 
InterfaceCOP
 
typedef
utility::pointer::owning_ptr
< InterfaceInfo
InterfaceInfoOP
 
typedef utility::vector1
< core::scoring::RDC
RDC_lines
 
typedef utility::vector1
< core::scoring::ResidualDipolarCoupling::RDC_lines
RDC_lines_collection
 
typedef core::Real Tensor [3][3]
 
typedef core::Real rvec [3]
 
typedef
utility::pointer::owning_ptr
< ResidualDipolarCouplingRigidSegments
ResidualDipolarCouplingRigidSegmentsOP
 
typedef
utility::pointer::owning_ptr
< ResidualDipolarCouplingRigidSegments
const > 
ResidualDipolarCouplingRigidSegmentsCOP
 

Functions

static core::Size max_interchain_sites (2)
 
void store_RDC_segments_in_pose (ResidualDipolarCouplingRigidSegmentsOP rdcrs_info, core::pose::Pose &pose)
 
ResidualDipolarCouplingRigidSegmentsCOP retrieve_RDC_segments_from_pose (core::pose::Pose const &pose)
 
ResidualDipolarCouplingRigidSegmentsOP retrieve_RDC_segments_from_pose (core::pose::Pose &pose)
 
std::ostream & operator<< (std::ostream &out, ResidualDipolarCouplingRigidSegments const &rdcrs)
 

Typedef Documentation

typedef core::Real protocols::scoring::rvec[3]
typedef core::Real protocols::scoring::Tensor[3][3]

Function Documentation

static core::Size protocols::scoring::max_interchain_sites ( )
static
std::ostream & protocols::scoring::operator<< ( std::ostream &  out,
ResidualDipolarCouplingRigidSegments const &  rdcrs 
)
ResidualDipolarCouplingRigidSegmentsCOP protocols::scoring::retrieve_RDC_segments_from_pose ( core::pose::Pose const &  pose)
ResidualDipolarCouplingRigidSegmentsOP protocols::scoring::retrieve_RDC_segments_from_pose ( core::pose::Pose pose)
void protocols::scoring::store_RDC_segments_in_pose ( ResidualDipolarCouplingRigidSegmentsOP  rdcrs_info,
core::pose::Pose pose 
)