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protocols::protein_interface_design::movers::RepackMinimize Member List

This is the complete list of members for protocols::protein_interface_design::movers::RepackMinimize, including all inherited members.

allowed_aas_protocols::simple_moves::DesignRepackMoverprotected
apply(Pose &pose)protocols::protein_interface_design::movers::RepackMinimizevirtual
protocols::moves::Mover::apply(core::io::serialization::PipeMap &pmap)protocols::moves::Movervirtual
automatic_repacking_definition_protocols::simple_moves::DesignRepackMoverprotected
clear_info()protocols::moves::Moverinlinevirtual
clear_task()protocols::simple_moves::DesignRepackMover
clear_task_factory()protocols::simple_moves::DesignRepackMover
clone() const protocols::protein_interface_design::movers::RepackMinimizevirtual
create()protocols::moves::Movervirtual
curr_min_bb_protocols::simple_moves::DesignRepackMoverprotected
curr_min_rb_protocols::simple_moves::DesignRepackMoverprotected
curr_min_sc_protocols::simple_moves::DesignRepackMoverprotected
design(bool const des)protocols::simple_moves::DesignRepackMoverinline
design() const protocols::simple_moves::DesignRepackMoverinline
design_partner1_protocols::simple_moves::DesignRepackMoverprotected
design_partner2_protocols::simple_moves::DesignRepackMoverprotected
DesignRepackMover()protocols::simple_moves::DesignRepackMover
DesignRepackMover(std::string const name)protocols::simple_moves::DesignRepackMover
Filters_map typedefprotocols::moves::Mover
fresh_instance() const protocols::protein_interface_design::movers::RepackMinimizeinlinevirtual
get_additional_output()protocols::moves::Movervirtual
get_current_job() const protocols::moves::Mover
get_current_tag() const protocols::moves::Moverinline
get_input_pose() const protocols::moves::Mover
get_last_move_status() const protocols::moves::Mover
get_name() const protocols::protein_interface_design::movers::RepackMinimizevirtual
get_native_pose() const protocols::moves::Mover
get_type() const protocols::moves::Moverinline
info()protocols::moves::Moverinlinevirtual
info() const protocols::moves::Moverinlinevirtual
interface_distance_cutoff_protocols::simple_moves::DesignRepackMoverprotected
last_proposal_density_ratio()protocols::moves::Moverinlinevirtual
min_bb(utility::vector1< bool > const &min_bb)protocols::simple_moves::DesignRepackMoverinline
min_bb() const protocols::simple_moves::DesignRepackMoverinline
min_bb_protocols::simple_moves::DesignRepackMoverprotected
min_bb_set() const protocols::simple_moves::DesignRepackMoverinline
min_bb_set_protocols::simple_moves::DesignRepackMoverprotected
min_rb(utility::vector1< bool > const min_rb)protocols::simple_moves::DesignRepackMoverinline
min_rb(bool const min_rb)protocols::simple_moves::DesignRepackMoverinline
min_rb() const protocols::simple_moves::DesignRepackMoverinline
min_rb_protocols::simple_moves::DesignRepackMoverprotected
min_rb_set() const protocols::simple_moves::DesignRepackMoverinline
min_rb_set_protocols::simple_moves::DesignRepackMoverprotected
min_sc(utility::vector1< bool > const &min_sc)protocols::simple_moves::DesignRepackMoverinline
min_sc() const protocols::simple_moves::DesignRepackMoverinline
min_sc_protocols::simple_moves::DesignRepackMoverprotected
min_sc_set() const protocols::simple_moves::DesignRepackMoverinline
min_sc_set_protocols::simple_moves::DesignRepackMoverprotected
Mover()protocols::moves::Mover
Mover(std::string const &type_name)protocols::moves::Mover
Mover(Mover const &other)protocols::moves::Mover
name()protocols::moves::Moverinlinestatic
operator=(Mover const &other)protocols::moves::Mover
optimize_foldtree() const protocols::simple_moves::DesignRepackMoverinline
optimize_foldtree(bool const opt)protocols::simple_moves::DesignRepackMoverinline
optimize_foldtree_protocols::simple_moves::DesignRepackMoverprotected
parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks, MoverCacheSP cache)protocols::moves::Movervirtual
parse_my_tag(utility::tag::TagPtr const tag, protocols::moves::DataMap &, protocols::filters::Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &)protocols::protein_interface_design::movers::RepackMinimizevirtual
parse_state(SerializableState const &state)protocols::moves::Movervirtual
Pose typedefprotocols::protein_interface_design::movers::RepackMinimize
PoseCOP typedefprotocols::moves::Mover
prevent_repacking(utility::vector1< core::Size > const p)protocols::simple_moves::DesignRepackMoverinline
prevent_repacking() const protocols::simple_moves::DesignRepackMoverinline
prevent_repacking_protocols::simple_moves::DesignRepackMoverprotected
Real typedefprotocols::protein_interface_design::movers::RepackMinimize
register_options()protocols::moves::Moverinlinestatic
reinitialize_for_each_job() const protocols::moves::Movervirtual
reinitialize_for_new_input() const protocols::moves::Movervirtual
repack_non_ala_protocols::simple_moves::DesignRepackMoverprotected
repack_partner1_protocols::simple_moves::DesignRepackMoverprotected
repack_partner2_protocols::simple_moves::DesignRepackMoverprotected
RepackMinimize()protocols::protein_interface_design::movers::RepackMinimize
RepackMinimize(ScoreFunctionCOP scorefxn_repack, ScoreFunctionCOP scorefxn_minimize, utility::vector1< core::Size > const target_residues, bool const repack_partner1=false, bool const repack_partner2=true, core::Real const interface_distance_cutoff=8.0, bool const repack_non_ala=true)protocols::protein_interface_design::movers::RepackMinimize
reset_status()protocols::moves::Mover
restrict_to_repacking(utility::vector1< core::Size > const p)protocols::simple_moves::DesignRepackMoverinline
restrict_to_repacking() const protocols::simple_moves::DesignRepackMoverinline
restrict_to_repacking_protocols::simple_moves::DesignRepackMoverprotected
save_state(SerializableState &state)protocols::moves::Movervirtual
ScoreFunction typedefprotocols::protein_interface_design::movers::RepackMinimize
ScoreFunctionCOP typedefprotocols::protein_interface_design::movers::RepackMinimize
ScoreFunctionOP typedefprotocols::protein_interface_design::movers::RepackMinimize
scorefxn_minimize() const protocols::simple_moves::DesignRepackMover
scorefxn_minimize_protocols::simple_moves::DesignRepackMoverprotected
scorefxn_repack() const protocols::simple_moves::DesignRepackMover
scorefxn_repack_protocols::simple_moves::DesignRepackMoverprotected
set_current_job(protocols::jobdist::BasicJobCOP job)protocols::moves::Mover
set_current_tag(std::string const &new_tag)protocols::moves::Moverinline
set_input_pose(PoseCOP pose)protocols::moves::Movervirtual
set_last_move_status(MoverStatus status)protocols::moves::Moverprotected
set_native_pose(PoseCOP pose)protocols::moves::Movervirtual
set_scorefxn_minimize(core::scoring::ScoreFunctionCOP scorefxn)protocols::simple_moves::DesignRepackMover
set_scorefxn_repack(core::scoring::ScoreFunctionCOP scorefxn)protocols::simple_moves::DesignRepackMover
setup_packer_and_movemap(core::pose::Pose const &pose)protocols::simple_moves::DesignRepackMover
Strings typedefprotocols::moves::Mover
symmetry_protocols::simple_moves::DesignRepackMoverprotected
TagPtr typedefprotocols::moves::Mover
target_residues_protocols::simple_moves::DesignRepackMoverprotected
task() const protocols::simple_moves::DesignRepackMover
task()protocols::simple_moves::DesignRepackMover
task_protocols::simple_moves::DesignRepackMoverprotected
task_factory(core::pack::task::TaskFactoryOP p)protocols::simple_moves::DesignRepackMover
task_factory()protocols::simple_moves::DesignRepackMover
task_factory() const protocols::simple_moves::DesignRepackMover
task_factory_protocols::simple_moves::DesignRepackMoverprotected
test_move(Pose &pose)protocols::moves::Moverinlinevirtual
type() const protocols::moves::Moverinline
type(const std::string &type_in)protocols::moves::Moverinline
use_preset_task(bool const bt)protocols::simple_moves::DesignRepackMoverinline
use_preset_task() const protocols::simple_moves::DesignRepackMoverinline
use_preset_task_protocols::simple_moves::DesignRepackMoverprotected
~DesignRepackMover()protocols::simple_moves::DesignRepackMovervirtual
~Mover()protocols::moves::Movervirtual
~RepackMinimize()protocols::protein_interface_design::movers::RepackMinimizevirtual